Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim9Q8C7M3 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.45■□□□□ 0.54
Trim9Q8C7M3 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Trim9Q8C7M3 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim9Q8C7M3 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim9Q8C7M3 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim9Q8C7M3 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.45■□□□□ 0.54
Trim9Q8C7M3 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim9Q8C7M3 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim9Q8C7M3 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim9Q8C7M3 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim9Q8C7M3 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim9Q8C7M3 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Trim9Q8C7M3 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim9Q8C7M3 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Trim9Q8C7M3 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim9Q8C7M3 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim9Q8C7M3 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Trim9Q8C7M3 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.44■□□□□ 0.54
Trim9Q8C7M3 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trim9Q8C7M3 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim9Q8C7M3 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim9Q8C7M3 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim9Q8C7M3 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
Trim9Q8C7M3 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Trim9Q8C7M3 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim9Q8C7M3 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim9Q8C7M3 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim9Q8C7M3 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim9Q8C7M3 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.43■□□□□ 0.54
Trim9Q8C7M3 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.43■□□□□ 0.54
Trim9Q8C7M3 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.43■□□□□ 0.54
Trim9Q8C7M3 Gm45058-201ENSMUST00000205810 766 ntBASIC18.43■□□□□ 0.54
Trim9Q8C7M3 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim9Q8C7M3 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim9Q8C7M3 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim9Q8C7M3 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim9Q8C7M3 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim9Q8C7M3 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim9Q8C7M3 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim9Q8C7M3 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim9Q8C7M3 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Trim9Q8C7M3 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim9Q8C7M3 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim9Q8C7M3 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.43■□□□□ 0.54
Trim9Q8C7M3 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim9Q8C7M3 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim9Q8C7M3 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Trim9Q8C7M3 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim9Q8C7M3 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
Trim9Q8C7M3 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim9Q8C7M3 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.42■□□□□ 0.54
Trim9Q8C7M3 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim9Q8C7M3 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim9Q8C7M3 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim9Q8C7M3 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Trim9Q8C7M3 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.42■□□□□ 0.54
Trim9Q8C7M3 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim9Q8C7M3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.42■□□□□ 0.54
Trim9Q8C7M3 Mir5130-201ENSMUST00000175160 84 ntBASIC18.42■□□□□ 0.54
Trim9Q8C7M3 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.42■□□□□ 0.54
Trim9Q8C7M3 Gm18115-201ENSMUST00000221209 621 ntBASIC18.42■□□□□ 0.54
Trim9Q8C7M3 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim9Q8C7M3 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim9Q8C7M3 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim9Q8C7M3 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim9Q8C7M3 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim9Q8C7M3 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim9Q8C7M3 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim9Q8C7M3 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim9Q8C7M3 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Trim9Q8C7M3 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim9Q8C7M3 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Trim9Q8C7M3 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim9Q8C7M3 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Trim9Q8C7M3 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim9Q8C7M3 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim9Q8C7M3 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim9Q8C7M3 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Trim9Q8C7M3 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim9Q8C7M3 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Trim9Q8C7M3 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim9Q8C7M3 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim9Q8C7M3 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Trim9Q8C7M3 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.41■□□□□ 0.54
Trim9Q8C7M3 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim9Q8C7M3 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim9Q8C7M3 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim9Q8C7M3 Mir1668-201ENSMUST00000184114 107 ntBASIC18.41■□□□□ 0.54
Trim9Q8C7M3 Gm18959-201ENSMUST00000208954 655 ntBASIC18.41■□□□□ 0.54
Trim9Q8C7M3 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Trim9Q8C7M3 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim9Q8C7M3 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim9Q8C7M3 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.41■□□□□ 0.54
Trim9Q8C7M3 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim9Q8C7M3 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Trim9Q8C7M3 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim9Q8C7M3 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Trim9Q8C7M3 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Trim9Q8C7M3 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms