Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Eri3Q8C460 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Eri3Q8C460 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Eri3Q8C460 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Eri3Q8C460 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Eri3Q8C460 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Eri3Q8C460 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Eri3Q8C460 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Eri3Q8C460 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Eri3Q8C460 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Eri3Q8C460 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Eri3Q8C460 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Eri3Q8C460 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.9■□□□□ 0.14
Eri3Q8C460 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.9■□□□□ 0.14
Eri3Q8C460 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.9■□□□□ 0.14
Eri3Q8C460 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Eri3Q8C460 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Eri3Q8C460 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Eri3Q8C460 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Eri3Q8C460 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Eri3Q8C460 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Eri3Q8C460 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Eri3Q8C460 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Eri3Q8C460 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Eri3Q8C460 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Eri3Q8C460 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Eri3Q8C460 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Eri3Q8C460 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Eri3Q8C460 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Eri3Q8C460 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Eri3Q8C460 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Eri3Q8C460 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Eri3Q8C460 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Eri3Q8C460 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Eri3Q8C460 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Eri3Q8C460 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Eri3Q8C460 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Eri3Q8C460 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Eri3Q8C460 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Eri3Q8C460 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Eri3Q8C460 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.89■□□□□ 0.13
Eri3Q8C460 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Eri3Q8C460 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Eri3Q8C460 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Eri3Q8C460 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Eri3Q8C460 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Eri3Q8C460 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Eri3Q8C460 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.89■□□□□ 0.13
Eri3Q8C460 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Eri3Q8C460 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Eri3Q8C460 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Eri3Q8C460 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Eri3Q8C460 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Eri3Q8C460 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Eri3Q8C460 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Eri3Q8C460 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Eri3Q8C460 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Eri3Q8C460 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.88■□□□□ 0.13
Eri3Q8C460 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Eri3Q8C460 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.88■□□□□ 0.13
Eri3Q8C460 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Eri3Q8C460 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Eri3Q8C460 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Eri3Q8C460 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Eri3Q8C460 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Eri3Q8C460 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Eri3Q8C460 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.88■□□□□ 0.13
Eri3Q8C460 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Eri3Q8C460 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Eri3Q8C460 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Eri3Q8C460 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Eri3Q8C460 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Eri3Q8C460 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Eri3Q8C460 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.87■□□□□ 0.13
Eri3Q8C460 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Eri3Q8C460 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Eri3Q8C460 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.87■□□□□ 0.13
Eri3Q8C460 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Eri3Q8C460 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.87■□□□□ 0.13
Eri3Q8C460 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Eri3Q8C460 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Eri3Q8C460 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Eri3Q8C460 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Eri3Q8C460 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Eri3Q8C460 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Eri3Q8C460 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Eri3Q8C460 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Eri3Q8C460 Actl10-202ENSMUST00000226583 1501 ntBASIC15.87■□□□□ 0.13
Eri3Q8C460 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
Eri3Q8C460 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Eri3Q8C460 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Eri3Q8C460 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Eri3Q8C460 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Eri3Q8C460 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Eri3Q8C460 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Eri3Q8C460 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Eri3Q8C460 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Eri3Q8C460 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Eri3Q8C460 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Eri3Q8C460 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms