Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Cps1Q8C196 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cps1Q8C196 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Cps1Q8C196 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC22.49■■□□□ 1.19
Cps1Q8C196 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cps1Q8C196 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cps1Q8C196 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cps1Q8C196 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
Cps1Q8C196 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cps1Q8C196 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Cps1Q8C196 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Cps1Q8C196 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cps1Q8C196 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Cps1Q8C196 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Cps1Q8C196 Ddx41-204ENSMUST00000224765 2199 ntBASIC22.49■■□□□ 1.19
Cps1Q8C196 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cps1Q8C196 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Cps1Q8C196 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cps1Q8C196 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Cps1Q8C196 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC22.48■■□□□ 1.19
Cps1Q8C196 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cps1Q8C196 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cps1Q8C196 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cps1Q8C196 Gm3928-201ENSMUST00000121141 1307 ntBASIC22.48■■□□□ 1.19
Cps1Q8C196 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC22.48■■□□□ 1.19
Cps1Q8C196 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cps1Q8C196 Gm16499-203ENSMUST00000204633 2177 ntBASIC22.48■■□□□ 1.19
Cps1Q8C196 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cps1Q8C196 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cps1Q8C196 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC22.47■■□□□ 1.19
Cps1Q8C196 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Cps1Q8C196 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC22.47■■□□□ 1.19
Cps1Q8C196 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC22.47■■□□□ 1.19
Cps1Q8C196 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cps1Q8C196 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cps1Q8C196 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC22.47■■□□□ 1.19
Cps1Q8C196 Gm37500-201ENSMUST00000192059 1443 ntBASIC22.47■■□□□ 1.19
Cps1Q8C196 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cps1Q8C196 Gm5953-201ENSMUST00000220644 2616 ntBASIC22.47■■□□□ 1.19
Cps1Q8C196 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cps1Q8C196 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cps1Q8C196 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cps1Q8C196 Gm24513-201ENSMUST00000174964 138 ntBASIC22.47■■□□□ 1.19
Cps1Q8C196 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC22.46■■□□□ 1.19
Cps1Q8C196 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC22.46■■□□□ 1.19
Cps1Q8C196 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cps1Q8C196 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Cps1Q8C196 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cps1Q8C196 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cps1Q8C196 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cps1Q8C196 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Cps1Q8C196 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC22.46■■□□□ 1.19
Cps1Q8C196 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cps1Q8C196 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cps1Q8C196 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC22.46■■□□□ 1.19
Cps1Q8C196 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC22.46■■□□□ 1.19
Cps1Q8C196 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC22.46■■□□□ 1.19
Cps1Q8C196 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cps1Q8C196 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
Cps1Q8C196 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cps1Q8C196 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cps1Q8C196 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
Cps1Q8C196 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.19
Cps1Q8C196 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
Cps1Q8C196 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Cps1Q8C196 Gm6858-201ENSMUST00000208582 1468 ntBASIC22.45■■□□□ 1.18
Cps1Q8C196 Gm11620-201ENSMUST00000118770 1845 ntBASIC22.45■■□□□ 1.18
Cps1Q8C196 Gm43808-201ENSMUST00000202534 2065 ntBASIC22.44■■□□□ 1.18
Cps1Q8C196 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Cps1Q8C196 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cps1Q8C196 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cps1Q8C196 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC22.44■■□□□ 1.18
Cps1Q8C196 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cps1Q8C196 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cps1Q8C196 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC22.44■■□□□ 1.18
Cps1Q8C196 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC22.43■■□□□ 1.18
Cps1Q8C196 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cps1Q8C196 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Cps1Q8C196 Gm45683-201ENSMUST00000210825 1247 ntBASIC22.43■■□□□ 1.18
Cps1Q8C196 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cps1Q8C196 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cps1Q8C196 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Cps1Q8C196 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cps1Q8C196 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC22.43■■□□□ 1.18
Cps1Q8C196 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Cps1Q8C196 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cps1Q8C196 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Cps1Q8C196 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cps1Q8C196 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cps1Q8C196 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC22.42■■□□□ 1.18
Cps1Q8C196 Gm27397-201ENSMUST00000184997 107 ntBASIC22.42■■□□□ 1.18
Cps1Q8C196 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC22.42■■□□□ 1.18
Cps1Q8C196 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC22.42■■□□□ 1.18
Cps1Q8C196 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cps1Q8C196 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Cps1Q8C196 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Cps1Q8C196 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cps1Q8C196 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cps1Q8C196 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cps1Q8C196 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC22.41■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms