Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trub1Q8C0D0 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trub1Q8C0D0 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trub1Q8C0D0 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trub1Q8C0D0 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trub1Q8C0D0 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trub1Q8C0D0 Gm13474-201ENSMUST00000122466 815 ntBASIC17.25■□□□□ 0.35
Trub1Q8C0D0 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Trub1Q8C0D0 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.25■□□□□ 0.35
Trub1Q8C0D0 Gm43799-201ENSMUST00000201845 579 ntBASIC17.25■□□□□ 0.35
Trub1Q8C0D0 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.25■□□□□ 0.35
Trub1Q8C0D0 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.25■□□□□ 0.35
Trub1Q8C0D0 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trub1Q8C0D0 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trub1Q8C0D0 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trub1Q8C0D0 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.25■□□□□ 0.35
Trub1Q8C0D0 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trub1Q8C0D0 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trub1Q8C0D0 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trub1Q8C0D0 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trub1Q8C0D0 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trub1Q8C0D0 Phf7-203ENSMUST00000226565 1971 ntBASIC17.24■□□□□ 0.35
Trub1Q8C0D0 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trub1Q8C0D0 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trub1Q8C0D0 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trub1Q8C0D0 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trub1Q8C0D0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.24■□□□□ 0.35
Trub1Q8C0D0 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.24■□□□□ 0.35
Trub1Q8C0D0 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trub1Q8C0D0 Actl10-202ENSMUST00000226583 1501 ntBASIC17.24■□□□□ 0.35
Trub1Q8C0D0 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trub1Q8C0D0 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trub1Q8C0D0 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trub1Q8C0D0 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trub1Q8C0D0 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trub1Q8C0D0 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trub1Q8C0D0 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trub1Q8C0D0 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trub1Q8C0D0 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Trub1Q8C0D0 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trub1Q8C0D0 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Trub1Q8C0D0 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trub1Q8C0D0 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trub1Q8C0D0 Gm15565-201ENSMUST00000118890 427 ntBASIC17.23■□□□□ 0.35
Trub1Q8C0D0 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.23■□□□□ 0.35
Trub1Q8C0D0 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.23■□□□□ 0.35
Trub1Q8C0D0 Gm7889-201ENSMUST00000185591 958 ntBASIC17.23■□□□□ 0.35
Trub1Q8C0D0 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trub1Q8C0D0 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trub1Q8C0D0 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trub1Q8C0D0 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Trub1Q8C0D0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trub1Q8C0D0 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trub1Q8C0D0 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.23■□□□□ 0.35
Trub1Q8C0D0 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trub1Q8C0D0 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Trub1Q8C0D0 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trub1Q8C0D0 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trub1Q8C0D0 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trub1Q8C0D0 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trub1Q8C0D0 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trub1Q8C0D0 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trub1Q8C0D0 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.22■□□□□ 0.35
Trub1Q8C0D0 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trub1Q8C0D0 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.22■□□□□ 0.35
Trub1Q8C0D0 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trub1Q8C0D0 Gm7213-201ENSMUST00000215977 950 ntBASIC17.22■□□□□ 0.35
Trub1Q8C0D0 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.22■□□□□ 0.35
Trub1Q8C0D0 Gm10566-201ENSMUST00000086739 996 ntBASIC17.22■□□□□ 0.35
Trub1Q8C0D0 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trub1Q8C0D0 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trub1Q8C0D0 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trub1Q8C0D0 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trub1Q8C0D0 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trub1Q8C0D0 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.22■□□□□ 0.35
Trub1Q8C0D0 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trub1Q8C0D0 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Trub1Q8C0D0 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trub1Q8C0D0 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trub1Q8C0D0 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trub1Q8C0D0 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Trub1Q8C0D0 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trub1Q8C0D0 Mir6982-201ENSMUST00000184354 68 ntBASIC17.21■□□□□ 0.35
Trub1Q8C0D0 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.21■□□□□ 0.35
Trub1Q8C0D0 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trub1Q8C0D0 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trub1Q8C0D0 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trub1Q8C0D0 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trub1Q8C0D0 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trub1Q8C0D0 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trub1Q8C0D0 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trub1Q8C0D0 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trub1Q8C0D0 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trub1Q8C0D0 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trub1Q8C0D0 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trub1Q8C0D0 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trub1Q8C0D0 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trub1Q8C0D0 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trub1Q8C0D0 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trub1Q8C0D0 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms