Protein–RNA interactions for Protein: Q8BY89

Slc44a2, Choline transporter-like protein 2, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a2Q8BY89 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc44a2Q8BY89 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc44a2Q8BY89 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.3■□□□□ 0.2
Slc44a2Q8BY89 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc44a2Q8BY89 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Slc44a2Q8BY89 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc44a2Q8BY89 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc44a2Q8BY89 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc44a2Q8BY89 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc44a2Q8BY89 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc44a2Q8BY89 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc44a2Q8BY89 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc44a2Q8BY89 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Slc44a2Q8BY89 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc44a2Q8BY89 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc44a2Q8BY89 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Slc44a2Q8BY89 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc44a2Q8BY89 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc44a2Q8BY89 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.29■□□□□ 0.2
Slc44a2Q8BY89 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Slc44a2Q8BY89 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Slc44a2Q8BY89 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Slc44a2Q8BY89 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc44a2Q8BY89 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Slc44a2Q8BY89 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc44a2Q8BY89 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Slc44a2Q8BY89 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Slc44a2Q8BY89 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc44a2Q8BY89 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc44a2Q8BY89 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Slc44a2Q8BY89 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Slc44a2Q8BY89 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc44a2Q8BY89 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc44a2Q8BY89 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc44a2Q8BY89 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Slc44a2Q8BY89 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Slc44a2Q8BY89 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc44a2Q8BY89 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc44a2Q8BY89 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc44a2Q8BY89 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Slc44a2Q8BY89 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc44a2Q8BY89 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc44a2Q8BY89 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc44a2Q8BY89 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc44a2Q8BY89 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Slc44a2Q8BY89 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc44a2Q8BY89 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Slc44a2Q8BY89 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc44a2Q8BY89 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc44a2Q8BY89 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Slc44a2Q8BY89 Gm13401-201ENSMUST00000117074 291 ntBASIC16.28■□□□□ 0.2
Slc44a2Q8BY89 Gm37856-201ENSMUST00000191634 999 ntBASIC16.28■□□□□ 0.2
Slc44a2Q8BY89 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.28■□□□□ 0.2
Slc44a2Q8BY89 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc44a2Q8BY89 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.28■□□□□ 0.2
Slc44a2Q8BY89 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc44a2Q8BY89 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Slc44a2Q8BY89 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc44a2Q8BY89 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.28■□□□□ 0.2
Slc44a2Q8BY89 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Slc44a2Q8BY89 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc44a2Q8BY89 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc44a2Q8BY89 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc44a2Q8BY89 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc44a2Q8BY89 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc44a2Q8BY89 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc44a2Q8BY89 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc44a2Q8BY89 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc44a2Q8BY89 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.27■□□□□ 0.2
Slc44a2Q8BY89 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Slc44a2Q8BY89 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc44a2Q8BY89 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc44a2Q8BY89 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.27■□□□□ 0.2
Slc44a2Q8BY89 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Slc44a2Q8BY89 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Slc44a2Q8BY89 Trmt13-210ENSMUST00000198454 880 ntBASIC16.27■□□□□ 0.2
Slc44a2Q8BY89 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc44a2Q8BY89 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc44a2Q8BY89 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slc44a2Q8BY89 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slc44a2Q8BY89 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.27■□□□□ 0.19
Slc44a2Q8BY89 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slc44a2Q8BY89 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.27■□□□□ 0.19
Slc44a2Q8BY89 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Slc44a2Q8BY89 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slc44a2Q8BY89 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slc44a2Q8BY89 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slc44a2Q8BY89 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc44a2Q8BY89 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc44a2Q8BY89 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc44a2Q8BY89 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc44a2Q8BY89 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc44a2Q8BY89 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Slc44a2Q8BY89 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Slc44a2Q8BY89 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Slc44a2Q8BY89 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.26■□□□□ 0.19
Slc44a2Q8BY89 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc44a2Q8BY89 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc44a2Q8BY89 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.26■□□□□ 0.19
Slc44a2Q8BY89 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms