Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp43Q8BUM9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp43Q8BUM9 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp43Q8BUM9 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.93■□□□□ 0.3
Usp43Q8BUM9 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp43Q8BUM9 Gm6433-201ENSMUST00000118634 875 ntBASIC16.93■□□□□ 0.3
Usp43Q8BUM9 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Usp43Q8BUM9 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp43Q8BUM9 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Usp43Q8BUM9 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Usp43Q8BUM9 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp43Q8BUM9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Usp43Q8BUM9 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp43Q8BUM9 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp43Q8BUM9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp43Q8BUM9 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp43Q8BUM9 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp43Q8BUM9 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp43Q8BUM9 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp43Q8BUM9 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.93■□□□□ 0.3
Usp43Q8BUM9 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Usp43Q8BUM9 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Usp43Q8BUM9 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp43Q8BUM9 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp43Q8BUM9 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp43Q8BUM9 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp43Q8BUM9 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp43Q8BUM9 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.92■□□□□ 0.3
Usp43Q8BUM9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Usp43Q8BUM9 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp43Q8BUM9 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp43Q8BUM9 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp43Q8BUM9 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp43Q8BUM9 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.92■□□□□ 0.3
Usp43Q8BUM9 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp43Q8BUM9 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp43Q8BUM9 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp43Q8BUM9 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Usp43Q8BUM9 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Usp43Q8BUM9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp43Q8BUM9 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Usp43Q8BUM9 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp43Q8BUM9 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp43Q8BUM9 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp43Q8BUM9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp43Q8BUM9 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.91■□□□□ 0.3
Usp43Q8BUM9 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp43Q8BUM9 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Usp43Q8BUM9 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Usp43Q8BUM9 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp43Q8BUM9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp43Q8BUM9 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Usp43Q8BUM9 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Usp43Q8BUM9 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Usp43Q8BUM9 Mir1668-201ENSMUST00000184114 107 ntBASIC16.91■□□□□ 0.3
Usp43Q8BUM9 Gm18115-201ENSMUST00000221209 621 ntBASIC16.91■□□□□ 0.3
Usp43Q8BUM9 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp43Q8BUM9 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp43Q8BUM9 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp43Q8BUM9 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp43Q8BUM9 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Usp43Q8BUM9 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Usp43Q8BUM9 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp43Q8BUM9 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp43Q8BUM9 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.91■□□□□ 0.3
Usp43Q8BUM9 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp43Q8BUM9 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Usp43Q8BUM9 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Usp43Q8BUM9 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp43Q8BUM9 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp43Q8BUM9 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Usp43Q8BUM9 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Usp43Q8BUM9 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Usp43Q8BUM9 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp43Q8BUM9 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Usp43Q8BUM9 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Usp43Q8BUM9 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.9■□□□□ 0.3
Usp43Q8BUM9 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.9■□□□□ 0.3
Usp43Q8BUM9 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.9■□□□□ 0.3
Usp43Q8BUM9 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.9■□□□□ 0.3
Usp43Q8BUM9 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Usp43Q8BUM9 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp43Q8BUM9 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp43Q8BUM9 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp43Q8BUM9 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp43Q8BUM9 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Usp43Q8BUM9 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Usp43Q8BUM9 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Usp43Q8BUM9 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp43Q8BUM9 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp43Q8BUM9 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp43Q8BUM9 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Usp43Q8BUM9 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp43Q8BUM9 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp43Q8BUM9 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Usp43Q8BUM9 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp43Q8BUM9 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp43Q8BUM9 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp43Q8BUM9 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp43Q8BUM9 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms