Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.16■□□□□ 0.18
Cpne3Q8BT60 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne3Q8BT60 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne3Q8BT60 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Cpne3Q8BT60 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne3Q8BT60 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne3Q8BT60 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne3Q8BT60 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne3Q8BT60 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne3Q8BT60 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne3Q8BT60 Gm17661-201ENSMUST00000170317 270 ntBASIC16.15■□□□□ 0.18
Cpne3Q8BT60 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne3Q8BT60 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne3Q8BT60 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne3Q8BT60 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Cpne3Q8BT60 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne3Q8BT60 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne3Q8BT60 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne3Q8BT60 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne3Q8BT60 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne3Q8BT60 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne3Q8BT60 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne3Q8BT60 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne3Q8BT60 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne3Q8BT60 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cpne3Q8BT60 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne3Q8BT60 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne3Q8BT60 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne3Q8BT60 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
Cpne3Q8BT60 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne3Q8BT60 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.14■□□□□ 0.17
Cpne3Q8BT60 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.14■□□□□ 0.17
Cpne3Q8BT60 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne3Q8BT60 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne3Q8BT60 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne3Q8BT60 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne3Q8BT60 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.14■□□□□ 0.17
Cpne3Q8BT60 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.14■□□□□ 0.17
Cpne3Q8BT60 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne3Q8BT60 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne3Q8BT60 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne3Q8BT60 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne3Q8BT60 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne3Q8BT60 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne3Q8BT60 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne3Q8BT60 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne3Q8BT60 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne3Q8BT60 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne3Q8BT60 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.14■□□□□ 0.17
Cpne3Q8BT60 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.14■□□□□ 0.17
Cpne3Q8BT60 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne3Q8BT60 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne3Q8BT60 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Cpne3Q8BT60 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Cpne3Q8BT60 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpne3Q8BT60 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpne3Q8BT60 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpne3Q8BT60 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpne3Q8BT60 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cpne3Q8BT60 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.13■□□□□ 0.17
Cpne3Q8BT60 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpne3Q8BT60 Gm13216-201ENSMUST00000117145 591 ntBASIC16.13■□□□□ 0.17
Cpne3Q8BT60 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpne3Q8BT60 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Cpne3Q8BT60 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpne3Q8BT60 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpne3Q8BT60 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Cpne3Q8BT60 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpne3Q8BT60 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpne3Q8BT60 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpne3Q8BT60 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.13■□□□□ 0.17
Cpne3Q8BT60 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpne3Q8BT60 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cpne3Q8BT60 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.13■□□□□ 0.17
Cpne3Q8BT60 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpne3Q8BT60 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Cpne3Q8BT60 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpne3Q8BT60 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.12■□□□□ 0.17
Cpne3Q8BT60 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpne3Q8BT60 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Cpne3Q8BT60 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpne3Q8BT60 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.12■□□□□ 0.17
Cpne3Q8BT60 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpne3Q8BT60 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpne3Q8BT60 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpne3Q8BT60 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Cpne3Q8BT60 Haglr-201ENSMUST00000100000 2085 ntBASIC16.12■□□□□ 0.17
Cpne3Q8BT60 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpne3Q8BT60 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cpne3Q8BT60 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpne3Q8BT60 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpne3Q8BT60 Mir1199-201ENSMUST00000117015 119 ntBASIC16.12■□□□□ 0.17
Cpne3Q8BT60 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cpne3Q8BT60 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpne3Q8BT60 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpne3Q8BT60 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpne3Q8BT60 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Cpne3Q8BT60 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Cpne3Q8BT60 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cpne3Q8BT60 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms