Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rd3Q8BRE0 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rd3Q8BRE0 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rd3Q8BRE0 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rd3Q8BRE0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rd3Q8BRE0 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.73■□□□□ 0.43
Rd3Q8BRE0 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rd3Q8BRE0 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rd3Q8BRE0 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rd3Q8BRE0 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.73■□□□□ 0.43
Rd3Q8BRE0 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rd3Q8BRE0 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rd3Q8BRE0 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Rd3Q8BRE0 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rd3Q8BRE0 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rd3Q8BRE0 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Rd3Q8BRE0 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rd3Q8BRE0 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rd3Q8BRE0 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rd3Q8BRE0 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.72■□□□□ 0.43
Rd3Q8BRE0 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Rd3Q8BRE0 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Rd3Q8BRE0 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rd3Q8BRE0 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rd3Q8BRE0 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rd3Q8BRE0 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rd3Q8BRE0 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Rd3Q8BRE0 Gm27459-201ENSMUST00000184860 107 ntBASIC17.72■□□□□ 0.43
Rd3Q8BRE0 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.72■□□□□ 0.43
Rd3Q8BRE0 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.72■□□□□ 0.43
Rd3Q8BRE0 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rd3Q8BRE0 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rd3Q8BRE0 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rd3Q8BRE0 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.72■□□□□ 0.43
Rd3Q8BRE0 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rd3Q8BRE0 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.72■□□□□ 0.43
Rd3Q8BRE0 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rd3Q8BRE0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Rd3Q8BRE0 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.71■□□□□ 0.43
Rd3Q8BRE0 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
Rd3Q8BRE0 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rd3Q8BRE0 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rd3Q8BRE0 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rd3Q8BRE0 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rd3Q8BRE0 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rd3Q8BRE0 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rd3Q8BRE0 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rd3Q8BRE0 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.71■□□□□ 0.43
Rd3Q8BRE0 Gm11452-201ENSMUST00000122376 690 ntBASIC17.71■□□□□ 0.43
Rd3Q8BRE0 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rd3Q8BRE0 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rd3Q8BRE0 Gm18421-201ENSMUST00000204122 625 ntBASIC17.71■□□□□ 0.43
Rd3Q8BRE0 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.71■□□□□ 0.43
Rd3Q8BRE0 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.71■□□□□ 0.43
Rd3Q8BRE0 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Rd3Q8BRE0 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Rd3Q8BRE0 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rd3Q8BRE0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rd3Q8BRE0 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rd3Q8BRE0 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Rd3Q8BRE0 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Rd3Q8BRE0 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rd3Q8BRE0 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rd3Q8BRE0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rd3Q8BRE0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rd3Q8BRE0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rd3Q8BRE0 Mir8098-201ENSMUST00000184011 137 ntBASIC17.7■□□□□ 0.42
Rd3Q8BRE0 Gm44450-201ENSMUST00000199528 114 ntBASIC17.7■□□□□ 0.42
Rd3Q8BRE0 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.7■□□□□ 0.42
Rd3Q8BRE0 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Rd3Q8BRE0 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rd3Q8BRE0 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Rd3Q8BRE0 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rd3Q8BRE0 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rd3Q8BRE0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rd3Q8BRE0 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rd3Q8BRE0 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rd3Q8BRE0 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rd3Q8BRE0 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rd3Q8BRE0 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rd3Q8BRE0 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rd3Q8BRE0 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rd3Q8BRE0 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rd3Q8BRE0 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rd3Q8BRE0 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rd3Q8BRE0 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Rd3Q8BRE0 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.69■□□□□ 0.42
Rd3Q8BRE0 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rd3Q8BRE0 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rd3Q8BRE0 Gm29707-201ENSMUST00000196325 491 ntBASIC17.69■□□□□ 0.42
Rd3Q8BRE0 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.69■□□□□ 0.42
Rd3Q8BRE0 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rd3Q8BRE0 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rd3Q8BRE0 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Rd3Q8BRE0 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rd3Q8BRE0 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rd3Q8BRE0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rd3Q8BRE0 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rd3Q8BRE0 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rd3Q8BRE0 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms