Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Suds3Q8BR65 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Suds3Q8BR65 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Suds3Q8BR65 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.2■□□□□ 0.34
Suds3Q8BR65 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Suds3Q8BR65 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Suds3Q8BR65 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Suds3Q8BR65 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Suds3Q8BR65 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Suds3Q8BR65 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.19■□□□□ 0.34
Suds3Q8BR65 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Suds3Q8BR65 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.19■□□□□ 0.34
Suds3Q8BR65 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Suds3Q8BR65 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Suds3Q8BR65 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Suds3Q8BR65 Gm24841-201ENSMUST00000158676 357 ntBASIC17.19■□□□□ 0.34
Suds3Q8BR65 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Suds3Q8BR65 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Suds3Q8BR65 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Suds3Q8BR65 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Suds3Q8BR65 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Suds3Q8BR65 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Suds3Q8BR65 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Suds3Q8BR65 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Suds3Q8BR65 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Suds3Q8BR65 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Suds3Q8BR65 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Suds3Q8BR65 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Suds3Q8BR65 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Suds3Q8BR65 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Suds3Q8BR65 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Suds3Q8BR65 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.18■□□□□ 0.34
Suds3Q8BR65 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Suds3Q8BR65 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Suds3Q8BR65 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Suds3Q8BR65 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Suds3Q8BR65 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Suds3Q8BR65 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Suds3Q8BR65 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Suds3Q8BR65 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Suds3Q8BR65 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Suds3Q8BR65 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Suds3Q8BR65 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Suds3Q8BR65 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.18■□□□□ 0.34
Suds3Q8BR65 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.18■□□□□ 0.34
Suds3Q8BR65 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Suds3Q8BR65 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Suds3Q8BR65 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Suds3Q8BR65 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Suds3Q8BR65 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Suds3Q8BR65 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Suds3Q8BR65 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Suds3Q8BR65 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Suds3Q8BR65 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Suds3Q8BR65 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Suds3Q8BR65 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Suds3Q8BR65 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.17■□□□□ 0.34
Suds3Q8BR65 Gm3375-201ENSMUST00000203929 796 ntBASIC17.17■□□□□ 0.34
Suds3Q8BR65 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Suds3Q8BR65 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Suds3Q8BR65 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Suds3Q8BR65 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Suds3Q8BR65 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Suds3Q8BR65 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Suds3Q8BR65 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Suds3Q8BR65 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
Suds3Q8BR65 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Suds3Q8BR65 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.17■□□□□ 0.34
Suds3Q8BR65 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Suds3Q8BR65 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Suds3Q8BR65 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Suds3Q8BR65 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Suds3Q8BR65 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Suds3Q8BR65 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Suds3Q8BR65 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Suds3Q8BR65 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Suds3Q8BR65 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Suds3Q8BR65 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Suds3Q8BR65 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Suds3Q8BR65 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Suds3Q8BR65 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Suds3Q8BR65 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.16■□□□□ 0.34
Suds3Q8BR65 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Suds3Q8BR65 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Suds3Q8BR65 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Suds3Q8BR65 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Suds3Q8BR65 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Suds3Q8BR65 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Suds3Q8BR65 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Suds3Q8BR65 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Suds3Q8BR65 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Suds3Q8BR65 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Suds3Q8BR65 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Suds3Q8BR65 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Suds3Q8BR65 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Suds3Q8BR65 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Suds3Q8BR65 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Suds3Q8BR65 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Suds3Q8BR65 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Suds3Q8BR65 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms