Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf4Q8BQZ5 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf4Q8BQZ5 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf4Q8BQZ5 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf4Q8BQZ5 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.25■□□□□ 0.19
Cpsf4Q8BQZ5 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf4Q8BQZ5 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf4Q8BQZ5 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf4Q8BQZ5 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Cpsf4Q8BQZ5 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf4Q8BQZ5 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf4Q8BQZ5 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Cpsf4Q8BQZ5 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf4Q8BQZ5 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Cpsf4Q8BQZ5 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf4Q8BQZ5 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf4Q8BQZ5 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.25■□□□□ 0.19
Cpsf4Q8BQZ5 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf4Q8BQZ5 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf4Q8BQZ5 Gm9987-201ENSMUST00000069768 567 ntBASIC16.25■□□□□ 0.19
Cpsf4Q8BQZ5 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf4Q8BQZ5 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf4Q8BQZ5 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf4Q8BQZ5 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf4Q8BQZ5 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf4Q8BQZ5 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf4Q8BQZ5 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf4Q8BQZ5 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf4Q8BQZ5 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf4Q8BQZ5 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.24■□□□□ 0.19
Cpsf4Q8BQZ5 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.24■□□□□ 0.19
Cpsf4Q8BQZ5 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf4Q8BQZ5 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf4Q8BQZ5 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf4Q8BQZ5 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf4Q8BQZ5 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf4Q8BQZ5 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf4Q8BQZ5 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf4Q8BQZ5 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf4Q8BQZ5 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf4Q8BQZ5 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf4Q8BQZ5 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf4Q8BQZ5 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf4Q8BQZ5 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf4Q8BQZ5 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.23■□□□□ 0.19
Cpsf4Q8BQZ5 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Cpsf4Q8BQZ5 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf4Q8BQZ5 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf4Q8BQZ5 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf4Q8BQZ5 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.23■□□□□ 0.19
Cpsf4Q8BQZ5 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Cpsf4Q8BQZ5 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Cpsf4Q8BQZ5 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf4Q8BQZ5 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf4Q8BQZ5 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf4Q8BQZ5 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.23■□□□□ 0.19
Cpsf4Q8BQZ5 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.23■□□□□ 0.19
Cpsf4Q8BQZ5 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf4Q8BQZ5 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.23■□□□□ 0.19
Cpsf4Q8BQZ5 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cpsf4Q8BQZ5 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cpsf4Q8BQZ5 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cpsf4Q8BQZ5 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cpsf4Q8BQZ5 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cpsf4Q8BQZ5 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.22■□□□□ 0.19
Cpsf4Q8BQZ5 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Cpsf4Q8BQZ5 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cpsf4Q8BQZ5 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.22■□□□□ 0.19
Cpsf4Q8BQZ5 Gm6433-201ENSMUST00000118634 875 ntBASIC16.22■□□□□ 0.19
Cpsf4Q8BQZ5 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.22■□□□□ 0.19
Cpsf4Q8BQZ5 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cpsf4Q8BQZ5 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Cpsf4Q8BQZ5 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cpsf4Q8BQZ5 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cpsf4Q8BQZ5 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cpsf4Q8BQZ5 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cpsf4Q8BQZ5 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cpsf4Q8BQZ5 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cpsf4Q8BQZ5 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cpsf4Q8BQZ5 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cpsf4Q8BQZ5 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cpsf4Q8BQZ5 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cpsf4Q8BQZ5 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cpsf4Q8BQZ5 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cpsf4Q8BQZ5 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.21■□□□□ 0.19
Cpsf4Q8BQZ5 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Cpsf4Q8BQZ5 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cpsf4Q8BQZ5 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.21■□□□□ 0.19
Cpsf4Q8BQZ5 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Cpsf4Q8BQZ5 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cpsf4Q8BQZ5 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cpsf4Q8BQZ5 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cpsf4Q8BQZ5 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cpsf4Q8BQZ5 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.21■□□□□ 0.19
Cpsf4Q8BQZ5 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Cpsf4Q8BQZ5 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpsf4Q8BQZ5 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpsf4Q8BQZ5 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpsf4Q8BQZ5 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpsf4Q8BQZ5 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms