Protein–RNA interactions for Protein: Q8BNE1

Tcaf1, TRPM8 channel-associated factor 1, mousemouse

Predictions only

Length 924 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcaf1Q8BNE1 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tcaf1Q8BNE1 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Tcaf1Q8BNE1 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tcaf1Q8BNE1 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tcaf1Q8BNE1 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tcaf1Q8BNE1 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tcaf1Q8BNE1 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tcaf1Q8BNE1 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tcaf1Q8BNE1 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.05■□□□□ 0.48
Tcaf1Q8BNE1 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tcaf1Q8BNE1 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Tcaf1Q8BNE1 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.05■□□□□ 0.48
Tcaf1Q8BNE1 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.05■□□□□ 0.48
Tcaf1Q8BNE1 Gm29707-201ENSMUST00000196325 491 ntBASIC18.05■□□□□ 0.48
Tcaf1Q8BNE1 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tcaf1Q8BNE1 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tcaf1Q8BNE1 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tcaf1Q8BNE1 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Tcaf1Q8BNE1 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tcaf1Q8BNE1 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.05■□□□□ 0.48
Tcaf1Q8BNE1 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tcaf1Q8BNE1 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Tcaf1Q8BNE1 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.05■□□□□ 0.48
Tcaf1Q8BNE1 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Tcaf1Q8BNE1 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.05■□□□□ 0.48
Tcaf1Q8BNE1 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
Tcaf1Q8BNE1 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Tcaf1Q8BNE1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Tcaf1Q8BNE1 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Tcaf1Q8BNE1 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tcaf1Q8BNE1 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tcaf1Q8BNE1 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tcaf1Q8BNE1 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tcaf1Q8BNE1 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tcaf1Q8BNE1 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Tcaf1Q8BNE1 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tcaf1Q8BNE1 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
Tcaf1Q8BNE1 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.04■□□□□ 0.48
Tcaf1Q8BNE1 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tcaf1Q8BNE1 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tcaf1Q8BNE1 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Tcaf1Q8BNE1 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tcaf1Q8BNE1 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tcaf1Q8BNE1 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tcaf1Q8BNE1 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tcaf1Q8BNE1 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tcaf1Q8BNE1 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tcaf1Q8BNE1 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tcaf1Q8BNE1 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tcaf1Q8BNE1 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tcaf1Q8BNE1 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tcaf1Q8BNE1 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.03■□□□□ 0.48
Tcaf1Q8BNE1 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.03■□□□□ 0.48
Tcaf1Q8BNE1 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Tcaf1Q8BNE1 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Tcaf1Q8BNE1 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.03■□□□□ 0.48
Tcaf1Q8BNE1 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tcaf1Q8BNE1 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tcaf1Q8BNE1 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Tcaf1Q8BNE1 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tcaf1Q8BNE1 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tcaf1Q8BNE1 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tcaf1Q8BNE1 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tcaf1Q8BNE1 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tcaf1Q8BNE1 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tcaf1Q8BNE1 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tcaf1Q8BNE1 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tcaf1Q8BNE1 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tcaf1Q8BNE1 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tcaf1Q8BNE1 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tcaf1Q8BNE1 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tcaf1Q8BNE1 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Tcaf1Q8BNE1 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Tcaf1Q8BNE1 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tcaf1Q8BNE1 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Tcaf1Q8BNE1 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.02■□□□□ 0.48
Tcaf1Q8BNE1 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tcaf1Q8BNE1 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tcaf1Q8BNE1 Gm7284-201ENSMUST00000131667 944 ntBASIC18.02■□□□□ 0.48
Tcaf1Q8BNE1 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.02■□□□□ 0.48
Tcaf1Q8BNE1 Gm21362-201ENSMUST00000194272 928 ntBASIC18.02■□□□□ 0.48
Tcaf1Q8BNE1 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tcaf1Q8BNE1 Gm7367-201ENSMUST00000057611 492 ntBASIC18.02■□□□□ 0.48
Tcaf1Q8BNE1 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Tcaf1Q8BNE1 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tcaf1Q8BNE1 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tcaf1Q8BNE1 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tcaf1Q8BNE1 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.02■□□□□ 0.47
Tcaf1Q8BNE1 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Tcaf1Q8BNE1 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tcaf1Q8BNE1 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Tcaf1Q8BNE1 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Tcaf1Q8BNE1 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.01■□□□□ 0.47
Tcaf1Q8BNE1 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tcaf1Q8BNE1 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tcaf1Q8BNE1 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tcaf1Q8BNE1 Gm27704-201ENSMUST00000185094 107 ntBASIC18.01■□□□□ 0.47
Tcaf1Q8BNE1 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tcaf1Q8BNE1 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tcaf1Q8BNE1 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms