Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col16a1Q8BLX7 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col16a1Q8BLX7 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Col16a1Q8BLX7 Gm37194-201ENSMUST00000193092 3031 ntBASIC21.92■■□□□ 1.1
Col16a1Q8BLX7 Gm13036-201ENSMUST00000117799 748 ntBASIC21.92■■□□□ 1.1
Col16a1Q8BLX7 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Col16a1Q8BLX7 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Col16a1Q8BLX7 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Col16a1Q8BLX7 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Col16a1Q8BLX7 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Col16a1Q8BLX7 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Col16a1Q8BLX7 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Col16a1Q8BLX7 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Col16a1Q8BLX7 Gm14822-201ENSMUST00000122247 291 ntBASIC21.91■■□□□ 1.1
Col16a1Q8BLX7 Gm11780-201ENSMUST00000136880 516 ntBASIC21.91■■□□□ 1.1
Col16a1Q8BLX7 Gm27628-201ENSMUST00000184911 107 ntBASIC21.91■■□□□ 1.1
Col16a1Q8BLX7 Gm6089-201ENSMUST00000197666 938 ntBASIC21.91■■□□□ 1.1
Col16a1Q8BLX7 AC084391.1-201ENSMUST00000200651 141 ntBASIC21.91■■□□□ 1.1
Col16a1Q8BLX7 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Col16a1Q8BLX7 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Col16a1Q8BLX7 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Col16a1Q8BLX7 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Col16a1Q8BLX7 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Col16a1Q8BLX7 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC21.91■■□□□ 1.1
Col16a1Q8BLX7 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC21.91■■□□□ 1.1
Col16a1Q8BLX7 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC21.91■■□□□ 1.1
Col16a1Q8BLX7 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Col16a1Q8BLX7 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC21.91■■□□□ 1.1
Col16a1Q8BLX7 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Col16a1Q8BLX7 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Col16a1Q8BLX7 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col16a1Q8BLX7 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col16a1Q8BLX7 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.9■■□□□ 1.1
Col16a1Q8BLX7 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col16a1Q8BLX7 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col16a1Q8BLX7 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC21.9■■□□□ 1.1
Col16a1Q8BLX7 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
Col16a1Q8BLX7 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
Col16a1Q8BLX7 Gm24513-201ENSMUST00000174964 138 ntBASIC21.9■■□□□ 1.1
Col16a1Q8BLX7 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC21.9■■□□□ 1.1
Col16a1Q8BLX7 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Col16a1Q8BLX7 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col16a1Q8BLX7 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col16a1Q8BLX7 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col16a1Q8BLX7 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col16a1Q8BLX7 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col16a1Q8BLX7 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col16a1Q8BLX7 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC21.89■■□□□ 1.1
Col16a1Q8BLX7 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Col16a1Q8BLX7 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
Col16a1Q8BLX7 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Col16a1Q8BLX7 Gm8097-201ENSMUST00000117903 829 ntBASIC21.89■■□□□ 1.09
Col16a1Q8BLX7 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC21.89■■□□□ 1.09
Col16a1Q8BLX7 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Col16a1Q8BLX7 AC114585.2-202ENSMUST00000228094 426 ntBASIC21.89■■□□□ 1.09
Col16a1Q8BLX7 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Col16a1Q8BLX7 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Col16a1Q8BLX7 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Col16a1Q8BLX7 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Col16a1Q8BLX7 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Col16a1Q8BLX7 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Col16a1Q8BLX7 Gm12497-201ENSMUST00000138778 237 ntBASIC21.88■■□□□ 1.09
Col16a1Q8BLX7 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC21.88■■□□□ 1.09
Col16a1Q8BLX7 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col16a1Q8BLX7 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col16a1Q8BLX7 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Col16a1Q8BLX7 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col16a1Q8BLX7 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Col16a1Q8BLX7 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Col16a1Q8BLX7 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Col16a1Q8BLX7 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC21.88■■□□□ 1.09
Col16a1Q8BLX7 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col16a1Q8BLX7 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col16a1Q8BLX7 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col16a1Q8BLX7 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Col16a1Q8BLX7 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Col16a1Q8BLX7 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC21.88■■□□□ 1.09
Col16a1Q8BLX7 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Col16a1Q8BLX7 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC21.87■■□□□ 1.09
Col16a1Q8BLX7 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
Col16a1Q8BLX7 Gm27397-201ENSMUST00000184997 107 ntBASIC21.87■■□□□ 1.09
Col16a1Q8BLX7 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col16a1Q8BLX7 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col16a1Q8BLX7 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col16a1Q8BLX7 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Col16a1Q8BLX7 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col16a1Q8BLX7 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col16a1Q8BLX7 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col16a1Q8BLX7 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Col16a1Q8BLX7 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Col16a1Q8BLX7 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col16a1Q8BLX7 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC21.87■■□□□ 1.09
Col16a1Q8BLX7 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
Col16a1Q8BLX7 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Col16a1Q8BLX7 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col16a1Q8BLX7 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC21.87■■□□□ 1.09
Col16a1Q8BLX7 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC21.87■■□□□ 1.09
Col16a1Q8BLX7 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col16a1Q8BLX7 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Col16a1Q8BLX7 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms