Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdhr3Q8BL00 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdhr3Q8BL00 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cdhr3Q8BL00 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Cdhr3Q8BL00 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdhr3Q8BL00 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdhr3Q8BL00 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdhr3Q8BL00 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cdhr3Q8BL00 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Cdhr3Q8BL00 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.63□□□□□ -0.07
Cdhr3Q8BL00 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Cdhr3Q8BL00 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdhr3Q8BL00 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdhr3Q8BL00 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdhr3Q8BL00 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.63□□□□□ -0.07
Cdhr3Q8BL00 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdhr3Q8BL00 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdhr3Q8BL00 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cdhr3Q8BL00 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdhr3Q8BL00 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdhr3Q8BL00 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cdhr3Q8BL00 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdhr3Q8BL00 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdhr3Q8BL00 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.62□□□□□ -0.07
Cdhr3Q8BL00 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdhr3Q8BL00 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdhr3Q8BL00 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Cdhr3Q8BL00 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cdhr3Q8BL00 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cdhr3Q8BL00 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Cdhr3Q8BL00 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdhr3Q8BL00 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.62□□□□□ -0.07
Cdhr3Q8BL00 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.62□□□□□ -0.07
Cdhr3Q8BL00 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cdhr3Q8BL00 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdhr3Q8BL00 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cdhr3Q8BL00 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdhr3Q8BL00 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdhr3Q8BL00 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdhr3Q8BL00 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cdhr3Q8BL00 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdhr3Q8BL00 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdhr3Q8BL00 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdhr3Q8BL00 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdhr3Q8BL00 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdhr3Q8BL00 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdhr3Q8BL00 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.61□□□□□ -0.07
Cdhr3Q8BL00 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdhr3Q8BL00 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdhr3Q8BL00 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdhr3Q8BL00 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cdhr3Q8BL00 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.61□□□□□ -0.07
Cdhr3Q8BL00 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdhr3Q8BL00 Gm12441-201ENSMUST00000121806 588 ntBASIC14.61□□□□□ -0.07
Cdhr3Q8BL00 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.61□□□□□ -0.07
Cdhr3Q8BL00 Gm27000-201ENSMUST00000182943 842 ntBASIC14.61□□□□□ -0.07
Cdhr3Q8BL00 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdhr3Q8BL00 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.61□□□□□ -0.07
Cdhr3Q8BL00 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Cdhr3Q8BL00 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdhr3Q8BL00 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cdhr3Q8BL00 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdhr3Q8BL00 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdhr3Q8BL00 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Cdhr3Q8BL00 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cdhr3Q8BL00 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.6□□□□□ -0.07
Cdhr3Q8BL00 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdhr3Q8BL00 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdhr3Q8BL00 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdhr3Q8BL00 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdhr3Q8BL00 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdhr3Q8BL00 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdhr3Q8BL00 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdhr3Q8BL00 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdhr3Q8BL00 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdhr3Q8BL00 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdhr3Q8BL00 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdhr3Q8BL00 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.6□□□□□ -0.07
Cdhr3Q8BL00 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdhr3Q8BL00 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdhr3Q8BL00 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.6□□□□□ -0.07
Cdhr3Q8BL00 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdhr3Q8BL00 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cdhr3Q8BL00 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdhr3Q8BL00 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdhr3Q8BL00 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.59□□□□□ -0.07
Cdhr3Q8BL00 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdhr3Q8BL00 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.59□□□□□ -0.07
Cdhr3Q8BL00 Gm37856-201ENSMUST00000191634 999 ntBASIC14.59□□□□□ -0.07
Cdhr3Q8BL00 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdhr3Q8BL00 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cdhr3Q8BL00 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cdhr3Q8BL00 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdhr3Q8BL00 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Cdhr3Q8BL00 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdhr3Q8BL00 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdhr3Q8BL00 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cdhr3Q8BL00 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cdhr3Q8BL00 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cdhr3Q8BL00 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms