Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Srrm4Q8BKA3 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Srrm4Q8BKA3 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.51□□□□□ -0.09
Srrm4Q8BKA3 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Srrm4Q8BKA3 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Srrm4Q8BKA3 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.51□□□□□ -0.09
Srrm4Q8BKA3 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
Srrm4Q8BKA3 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Srrm4Q8BKA3 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.51□□□□□ -0.09
Srrm4Q8BKA3 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Srrm4Q8BKA3 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Srrm4Q8BKA3 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Srrm4Q8BKA3 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Srrm4Q8BKA3 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Srrm4Q8BKA3 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Srrm4Q8BKA3 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Srrm4Q8BKA3 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Srrm4Q8BKA3 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Srrm4Q8BKA3 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Srrm4Q8BKA3 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Srrm4Q8BKA3 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Srrm4Q8BKA3 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.5□□□□□ -0.09
Srrm4Q8BKA3 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.5□□□□□ -0.09
Srrm4Q8BKA3 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Srrm4Q8BKA3 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Srrm4Q8BKA3 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Srrm4Q8BKA3 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Srrm4Q8BKA3 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Srrm4Q8BKA3 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Srrm4Q8BKA3 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Srrm4Q8BKA3 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Srrm4Q8BKA3 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Srrm4Q8BKA3 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Srrm4Q8BKA3 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Srrm4Q8BKA3 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Srrm4Q8BKA3 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Srrm4Q8BKA3 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Srrm4Q8BKA3 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Srrm4Q8BKA3 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Srrm4Q8BKA3 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Srrm4Q8BKA3 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Srrm4Q8BKA3 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Srrm4Q8BKA3 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Srrm4Q8BKA3 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Srrm4Q8BKA3 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Srrm4Q8BKA3 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Srrm4Q8BKA3 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Srrm4Q8BKA3 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Srrm4Q8BKA3 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Srrm4Q8BKA3 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.49□□□□□ -0.09
Srrm4Q8BKA3 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Srrm4Q8BKA3 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Srrm4Q8BKA3 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
Srrm4Q8BKA3 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.49□□□□□ -0.09
Srrm4Q8BKA3 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.49□□□□□ -0.09
Srrm4Q8BKA3 Gm18032-201ENSMUST00000222541 538 ntBASIC14.49□□□□□ -0.09
Srrm4Q8BKA3 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Srrm4Q8BKA3 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Srrm4Q8BKA3 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Srrm4Q8BKA3 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Srrm4Q8BKA3 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Srrm4Q8BKA3 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Srrm4Q8BKA3 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Srrm4Q8BKA3 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Srrm4Q8BKA3 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Srrm4Q8BKA3 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Srrm4Q8BKA3 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Srrm4Q8BKA3 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Srrm4Q8BKA3 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Srrm4Q8BKA3 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Srrm4Q8BKA3 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Srrm4Q8BKA3 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Srrm4Q8BKA3 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Srrm4Q8BKA3 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Srrm4Q8BKA3 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Srrm4Q8BKA3 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Srrm4Q8BKA3 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Srrm4Q8BKA3 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Srrm4Q8BKA3 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Srrm4Q8BKA3 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Srrm4Q8BKA3 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Srrm4Q8BKA3 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Srrm4Q8BKA3 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Srrm4Q8BKA3 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Srrm4Q8BKA3 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Srrm4Q8BKA3 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Srrm4Q8BKA3 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Srrm4Q8BKA3 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Srrm4Q8BKA3 Gm18958-201ENSMUST00000174258 762 ntBASIC14.47□□□□□ -0.09
Srrm4Q8BKA3 Gm7977-201ENSMUST00000193787 748 ntBASIC14.47□□□□□ -0.09
Srrm4Q8BKA3 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Srrm4Q8BKA3 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.47□□□□□ -0.09
Srrm4Q8BKA3 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Srrm4Q8BKA3 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Srrm4Q8BKA3 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.47□□□□□ -0.09
Srrm4Q8BKA3 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Srrm4Q8BKA3 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Srrm4Q8BKA3 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Srrm4Q8BKA3 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Srrm4Q8BKA3 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms