Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Usp1Q8BJQ2 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Usp1Q8BJQ2 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Usp1Q8BJQ2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Usp1Q8BJQ2 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp1Q8BJQ2 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp1Q8BJQ2 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp1Q8BJQ2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp1Q8BJQ2 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp1Q8BJQ2 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp1Q8BJQ2 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp1Q8BJQ2 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp1Q8BJQ2 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp1Q8BJQ2 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp1Q8BJQ2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp1Q8BJQ2 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp1Q8BJQ2 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp1Q8BJQ2 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Usp1Q8BJQ2 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Usp1Q8BJQ2 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
Usp1Q8BJQ2 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.73■□□□□ 0.43
Usp1Q8BJQ2 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Usp1Q8BJQ2 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp1Q8BJQ2 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.73■□□□□ 0.43
Usp1Q8BJQ2 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Usp1Q8BJQ2 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Usp1Q8BJQ2 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Usp1Q8BJQ2 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp1Q8BJQ2 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Usp1Q8BJQ2 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Usp1Q8BJQ2 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp1Q8BJQ2 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp1Q8BJQ2 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp1Q8BJQ2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Usp1Q8BJQ2 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp1Q8BJQ2 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp1Q8BJQ2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp1Q8BJQ2 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp1Q8BJQ2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.72■□□□□ 0.43
Usp1Q8BJQ2 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Usp1Q8BJQ2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp1Q8BJQ2 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Usp1Q8BJQ2 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.72■□□□□ 0.43
Usp1Q8BJQ2 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.72■□□□□ 0.43
Usp1Q8BJQ2 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp1Q8BJQ2 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp1Q8BJQ2 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Usp1Q8BJQ2 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp1Q8BJQ2 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp1Q8BJQ2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.72■□□□□ 0.43
Usp1Q8BJQ2 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.72■□□□□ 0.43
Usp1Q8BJQ2 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Usp1Q8BJQ2 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp1Q8BJQ2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Usp1Q8BJQ2 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp1Q8BJQ2 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Usp1Q8BJQ2 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Usp1Q8BJQ2 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp1Q8BJQ2 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp1Q8BJQ2 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp1Q8BJQ2 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.71■□□□□ 0.43
Usp1Q8BJQ2 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.71■□□□□ 0.43
Usp1Q8BJQ2 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Usp1Q8BJQ2 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Usp1Q8BJQ2 Gm34391-201ENSMUST00000203706 907 ntBASIC17.71■□□□□ 0.43
Usp1Q8BJQ2 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.71■□□□□ 0.43
Usp1Q8BJQ2 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp1Q8BJQ2 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Usp1Q8BJQ2 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp1Q8BJQ2 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Usp1Q8BJQ2 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Usp1Q8BJQ2 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp1Q8BJQ2 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Usp1Q8BJQ2 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp1Q8BJQ2 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Usp1Q8BJQ2 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp1Q8BJQ2 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Usp1Q8BJQ2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.7■□□□□ 0.42
Usp1Q8BJQ2 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp1Q8BJQ2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp1Q8BJQ2 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Usp1Q8BJQ2 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Usp1Q8BJQ2 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.7■□□□□ 0.42
Usp1Q8BJQ2 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp1Q8BJQ2 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.7■□□□□ 0.42
Usp1Q8BJQ2 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Usp1Q8BJQ2 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp1Q8BJQ2 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.7■□□□□ 0.42
Usp1Q8BJQ2 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.7■□□□□ 0.42
Usp1Q8BJQ2 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.7■□□□□ 0.42
Usp1Q8BJQ2 Birc2-201ENSMUST00000054878 378 ntBASIC17.7■□□□□ 0.42
Usp1Q8BJQ2 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.7■□□□□ 0.42
Usp1Q8BJQ2 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp1Q8BJQ2 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Usp1Q8BJQ2 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp1Q8BJQ2 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.7■□□□□ 0.42
Usp1Q8BJQ2 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp1Q8BJQ2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Usp1Q8BJQ2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Usp1Q8BJQ2 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms