Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Samm50Q8BGH2 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Samm50Q8BGH2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Samm50Q8BGH2 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Samm50Q8BGH2 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Samm50Q8BGH2 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC19.61■□□□□ 0.73
Samm50Q8BGH2 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.61■□□□□ 0.73
Samm50Q8BGH2 Dancr-204ENSMUST00000132389 2347 ntBASIC19.61■□□□□ 0.73
Samm50Q8BGH2 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Samm50Q8BGH2 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Samm50Q8BGH2 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Samm50Q8BGH2 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Samm50Q8BGH2 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Samm50Q8BGH2 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Samm50Q8BGH2 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Samm50Q8BGH2 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Samm50Q8BGH2 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Samm50Q8BGH2 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Samm50Q8BGH2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Samm50Q8BGH2 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Samm50Q8BGH2 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
Samm50Q8BGH2 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Samm50Q8BGH2 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Samm50Q8BGH2 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Samm50Q8BGH2 Gm38027-201ENSMUST00000192315 235 ntBASIC19.6■□□□□ 0.73
Samm50Q8BGH2 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Samm50Q8BGH2 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Samm50Q8BGH2 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.6■□□□□ 0.73
Samm50Q8BGH2 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Samm50Q8BGH2 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Samm50Q8BGH2 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Samm50Q8BGH2 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Samm50Q8BGH2 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Samm50Q8BGH2 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Samm50Q8BGH2 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Samm50Q8BGH2 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.6■□□□□ 0.73
Samm50Q8BGH2 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Samm50Q8BGH2 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Samm50Q8BGH2 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Samm50Q8BGH2 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Samm50Q8BGH2 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Samm50Q8BGH2 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC19.59■□□□□ 0.73
Samm50Q8BGH2 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Samm50Q8BGH2 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Samm50Q8BGH2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.59■□□□□ 0.73
Samm50Q8BGH2 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Samm50Q8BGH2 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Samm50Q8BGH2 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
Samm50Q8BGH2 Gm43799-201ENSMUST00000201845 579 ntBASIC19.59■□□□□ 0.73
Samm50Q8BGH2 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Samm50Q8BGH2 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Samm50Q8BGH2 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Samm50Q8BGH2 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Samm50Q8BGH2 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.59■□□□□ 0.73
Samm50Q8BGH2 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Samm50Q8BGH2 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
Samm50Q8BGH2 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Samm50Q8BGH2 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Samm50Q8BGH2 Gm42918-201ENSMUST00000199249 1580 ntBASIC19.58■□□□□ 0.73
Samm50Q8BGH2 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Samm50Q8BGH2 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Samm50Q8BGH2 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Samm50Q8BGH2 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.58■□□□□ 0.72
Samm50Q8BGH2 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Samm50Q8BGH2 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Samm50Q8BGH2 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Samm50Q8BGH2 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Samm50Q8BGH2 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Samm50Q8BGH2 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Samm50Q8BGH2 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Samm50Q8BGH2 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Samm50Q8BGH2 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Samm50Q8BGH2 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Samm50Q8BGH2 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Samm50Q8BGH2 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Samm50Q8BGH2 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Samm50Q8BGH2 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Samm50Q8BGH2 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Samm50Q8BGH2 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Samm50Q8BGH2 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Samm50Q8BGH2 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Samm50Q8BGH2 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Samm50Q8BGH2 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Samm50Q8BGH2 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Samm50Q8BGH2 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Samm50Q8BGH2 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.57■□□□□ 0.72
Samm50Q8BGH2 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Samm50Q8BGH2 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Samm50Q8BGH2 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Samm50Q8BGH2 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Samm50Q8BGH2 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Samm50Q8BGH2 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Samm50Q8BGH2 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Samm50Q8BGH2 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Samm50Q8BGH2 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Samm50Q8BGH2 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Samm50Q8BGH2 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Samm50Q8BGH2 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Samm50Q8BGH2 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Samm50Q8BGH2 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms