Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trim6Q8BGE7 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.8■□□□□ 0.44
Trim6Q8BGE7 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trim6Q8BGE7 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim6Q8BGE7 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trim6Q8BGE7 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim6Q8BGE7 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim6Q8BGE7 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Trim6Q8BGE7 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim6Q8BGE7 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim6Q8BGE7 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim6Q8BGE7 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim6Q8BGE7 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim6Q8BGE7 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim6Q8BGE7 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Trim6Q8BGE7 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim6Q8BGE7 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim6Q8BGE7 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim6Q8BGE7 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim6Q8BGE7 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim6Q8BGE7 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim6Q8BGE7 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim6Q8BGE7 Gm12896-201ENSMUST00000118430 226 ntBASIC17.79■□□□□ 0.44
Trim6Q8BGE7 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.79■□□□□ 0.44
Trim6Q8BGE7 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.79■□□□□ 0.44
Trim6Q8BGE7 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim6Q8BGE7 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim6Q8BGE7 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim6Q8BGE7 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim6Q8BGE7 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim6Q8BGE7 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim6Q8BGE7 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim6Q8BGE7 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim6Q8BGE7 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim6Q8BGE7 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Trim6Q8BGE7 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim6Q8BGE7 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim6Q8BGE7 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim6Q8BGE7 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim6Q8BGE7 Gm37179-201ENSMUST00000194862 823 ntBASIC17.78■□□□□ 0.44
Trim6Q8BGE7 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.78■□□□□ 0.44
Trim6Q8BGE7 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim6Q8BGE7 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Trim6Q8BGE7 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim6Q8BGE7 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim6Q8BGE7 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim6Q8BGE7 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim6Q8BGE7 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim6Q8BGE7 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim6Q8BGE7 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim6Q8BGE7 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim6Q8BGE7 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Trim6Q8BGE7 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim6Q8BGE7 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Trim6Q8BGE7 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim6Q8BGE7 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim6Q8BGE7 Gm11249-201ENSMUST00000117071 859 ntBASIC17.77■□□□□ 0.44
Trim6Q8BGE7 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.77■□□□□ 0.44
Trim6Q8BGE7 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.77■□□□□ 0.44
Trim6Q8BGE7 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim6Q8BGE7 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim6Q8BGE7 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.77■□□□□ 0.44
Trim6Q8BGE7 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim6Q8BGE7 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim6Q8BGE7 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Trim6Q8BGE7 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim6Q8BGE7 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim6Q8BGE7 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim6Q8BGE7 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim6Q8BGE7 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.76■□□□□ 0.43
Trim6Q8BGE7 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim6Q8BGE7 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim6Q8BGE7 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.76■□□□□ 0.43
Trim6Q8BGE7 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim6Q8BGE7 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim6Q8BGE7 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Trim6Q8BGE7 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim6Q8BGE7 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim6Q8BGE7 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim6Q8BGE7 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trim6Q8BGE7 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim6Q8BGE7 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim6Q8BGE7 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim6Q8BGE7 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim6Q8BGE7 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim6Q8BGE7 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Trim6Q8BGE7 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim6Q8BGE7 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim6Q8BGE7 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim6Q8BGE7 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim6Q8BGE7 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim6Q8BGE7 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim6Q8BGE7 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trim6Q8BGE7 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Trim6Q8BGE7 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.75■□□□□ 0.43
Trim6Q8BGE7 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim6Q8BGE7 Gm13158-201ENSMUST00000122007 736 ntBASIC17.75■□□□□ 0.43
Trim6Q8BGE7 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim6Q8BGE7 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.75■□□□□ 0.43
Trim6Q8BGE7 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 117.7 ms