Protein–RNA interactions for Protein: Q8BGA5

Krr1, KRR1 small subunit processome component homolog, mousemouse

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krr1Q8BGA5 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.85■□□□□ 0.13
Krr1Q8BGA5 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Krr1Q8BGA5 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Krr1Q8BGA5 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Krr1Q8BGA5 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.85■□□□□ 0.13
Krr1Q8BGA5 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.85■□□□□ 0.13
Krr1Q8BGA5 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.85■□□□□ 0.13
Krr1Q8BGA5 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.85■□□□□ 0.13
Krr1Q8BGA5 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
Krr1Q8BGA5 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Krr1Q8BGA5 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Krr1Q8BGA5 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Krr1Q8BGA5 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Krr1Q8BGA5 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Krr1Q8BGA5 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Krr1Q8BGA5 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Krr1Q8BGA5 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Krr1Q8BGA5 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Krr1Q8BGA5 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Krr1Q8BGA5 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.84■□□□□ 0.13
Krr1Q8BGA5 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Krr1Q8BGA5 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Krr1Q8BGA5 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Krr1Q8BGA5 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Krr1Q8BGA5 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Krr1Q8BGA5 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Krr1Q8BGA5 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Krr1Q8BGA5 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Krr1Q8BGA5 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.84■□□□□ 0.13
Krr1Q8BGA5 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Krr1Q8BGA5 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Krr1Q8BGA5 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Krr1Q8BGA5 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Krr1Q8BGA5 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Krr1Q8BGA5 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Krr1Q8BGA5 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Krr1Q8BGA5 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Krr1Q8BGA5 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.84■□□□□ 0.13
Krr1Q8BGA5 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Krr1Q8BGA5 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Krr1Q8BGA5 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.13
Krr1Q8BGA5 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Krr1Q8BGA5 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.83■□□□□ 0.13
Krr1Q8BGA5 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Krr1Q8BGA5 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Krr1Q8BGA5 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Krr1Q8BGA5 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.83■□□□□ 0.12
Krr1Q8BGA5 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Krr1Q8BGA5 Gm12382-201ENSMUST00000122005 922 ntBASIC15.83■□□□□ 0.12
Krr1Q8BGA5 Gm29257-201ENSMUST00000186115 639 ntBASIC15.83■□□□□ 0.12
Krr1Q8BGA5 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.83■□□□□ 0.12
Krr1Q8BGA5 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.83■□□□□ 0.12
Krr1Q8BGA5 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.83■□□□□ 0.12
Krr1Q8BGA5 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Krr1Q8BGA5 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.83■□□□□ 0.12
Krr1Q8BGA5 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.83■□□□□ 0.12
Krr1Q8BGA5 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Krr1Q8BGA5 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Krr1Q8BGA5 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Krr1Q8BGA5 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Krr1Q8BGA5 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.82■□□□□ 0.12
Krr1Q8BGA5 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Krr1Q8BGA5 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Krr1Q8BGA5 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Krr1Q8BGA5 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Krr1Q8BGA5 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Krr1Q8BGA5 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.82■□□□□ 0.12
Krr1Q8BGA5 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Krr1Q8BGA5 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.82■□□□□ 0.12
Krr1Q8BGA5 AC135637.1-201ENSMUST00000227750 365 ntBASIC15.82■□□□□ 0.12
Krr1Q8BGA5 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Krr1Q8BGA5 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Krr1Q8BGA5 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Krr1Q8BGA5 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Krr1Q8BGA5 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Krr1Q8BGA5 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Krr1Q8BGA5 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Krr1Q8BGA5 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Krr1Q8BGA5 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Krr1Q8BGA5 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Krr1Q8BGA5 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Krr1Q8BGA5 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Krr1Q8BGA5 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Krr1Q8BGA5 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Krr1Q8BGA5 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Krr1Q8BGA5 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
Krr1Q8BGA5 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.81■□□□□ 0.12
Krr1Q8BGA5 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Krr1Q8BGA5 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Krr1Q8BGA5 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.81■□□□□ 0.12
Krr1Q8BGA5 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.81■□□□□ 0.12
Krr1Q8BGA5 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Krr1Q8BGA5 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Krr1Q8BGA5 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Krr1Q8BGA5 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Krr1Q8BGA5 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Krr1Q8BGA5 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Krr1Q8BGA5 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Krr1Q8BGA5 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Krr1Q8BGA5 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms