Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trim50Q810I2 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim50Q810I2 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim50Q810I2 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim50Q810I2 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim50Q810I2 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim50Q810I2 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim50Q810I2 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim50Q810I2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim50Q810I2 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.3■□□□□ 0.2
Trim50Q810I2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trim50Q810I2 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.3■□□□□ 0.2
Trim50Q810I2 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim50Q810I2 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim50Q810I2 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim50Q810I2 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim50Q810I2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim50Q810I2 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.3■□□□□ 0.2
Trim50Q810I2 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Trim50Q810I2 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.3■□□□□ 0.2
Trim50Q810I2 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.3■□□□□ 0.2
Trim50Q810I2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim50Q810I2 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim50Q810I2 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim50Q810I2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim50Q810I2 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim50Q810I2 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim50Q810I2 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim50Q810I2 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim50Q810I2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim50Q810I2 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim50Q810I2 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim50Q810I2 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.29■□□□□ 0.2
Trim50Q810I2 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim50Q810I2 Gm16061-201ENSMUST00000122167 857 ntBASIC16.29■□□□□ 0.2
Trim50Q810I2 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Trim50Q810I2 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim50Q810I2 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim50Q810I2 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trim50Q810I2 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Trim50Q810I2 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim50Q810I2 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim50Q810I2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim50Q810I2 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim50Q810I2 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim50Q810I2 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim50Q810I2 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim50Q810I2 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trim50Q810I2 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim50Q810I2 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim50Q810I2 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trim50Q810I2 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim50Q810I2 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim50Q810I2 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim50Q810I2 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim50Q810I2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
Trim50Q810I2 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.28■□□□□ 0.2
Trim50Q810I2 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim50Q810I2 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trim50Q810I2 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.28■□□□□ 0.2
Trim50Q810I2 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim50Q810I2 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.28■□□□□ 0.2
Trim50Q810I2 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.28■□□□□ 0.2
Trim50Q810I2 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.28■□□□□ 0.2
Trim50Q810I2 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trim50Q810I2 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim50Q810I2 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim50Q810I2 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim50Q810I2 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim50Q810I2 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim50Q810I2 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim50Q810I2 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim50Q810I2 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim50Q810I2 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim50Q810I2 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Trim50Q810I2 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Trim50Q810I2 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim50Q810I2 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim50Q810I2 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim50Q810I2 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.27■□□□□ 0.2
Trim50Q810I2 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.27■□□□□ 0.2
Trim50Q810I2 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim50Q810I2 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim50Q810I2 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.27■□□□□ 0.2
Trim50Q810I2 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim50Q810I2 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim50Q810I2 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trim50Q810I2 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Trim50Q810I2 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trim50Q810I2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim50Q810I2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim50Q810I2 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.26■□□□□ 0.19
Trim50Q810I2 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim50Q810I2 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.26■□□□□ 0.19
Trim50Q810I2 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim50Q810I2 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim50Q810I2 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trim50Q810I2 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Trim50Q810I2 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim50Q810I2 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms