Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc28Q80XJ3 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc28Q80XJ3 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc28Q80XJ3 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc28Q80XJ3 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc28Q80XJ3 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ttc28Q80XJ3 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ttc28Q80XJ3 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc28Q80XJ3 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc28Q80XJ3 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc28Q80XJ3 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc28Q80XJ3 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.03□□□□□ -0.16
Ttc28Q80XJ3 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.03□□□□□ -0.16
Ttc28Q80XJ3 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc28Q80XJ3 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.03□□□□□ -0.16
Ttc28Q80XJ3 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc28Q80XJ3 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ttc28Q80XJ3 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.03□□□□□ -0.16
Ttc28Q80XJ3 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc28Q80XJ3 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc28Q80XJ3 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc28Q80XJ3 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc28Q80XJ3 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc28Q80XJ3 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc28Q80XJ3 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc28Q80XJ3 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ttc28Q80XJ3 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ttc28Q80XJ3 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.02□□□□□ -0.16
Ttc28Q80XJ3 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ttc28Q80XJ3 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ttc28Q80XJ3 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ttc28Q80XJ3 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ttc28Q80XJ3 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.02□□□□□ -0.16
Ttc28Q80XJ3 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ttc28Q80XJ3 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ttc28Q80XJ3 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ttc28Q80XJ3 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ttc28Q80XJ3 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ttc28Q80XJ3 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.02□□□□□ -0.17
Ttc28Q80XJ3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ttc28Q80XJ3 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ttc28Q80XJ3 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ttc28Q80XJ3 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ttc28Q80XJ3 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Ttc28Q80XJ3 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ttc28Q80XJ3 Gm12497-201ENSMUST00000138778 237 ntBASIC14.02□□□□□ -0.17
Ttc28Q80XJ3 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.02□□□□□ -0.17
Ttc28Q80XJ3 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ttc28Q80XJ3 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ttc28Q80XJ3 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ttc28Q80XJ3 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ttc28Q80XJ3 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ttc28Q80XJ3 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ttc28Q80XJ3 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Ttc28Q80XJ3 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Ttc28Q80XJ3 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.01□□□□□ -0.17
Ttc28Q80XJ3 Gm25911-201ENSMUST00000157621 56 ntBASIC14.01□□□□□ -0.17
Ttc28Q80XJ3 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.01□□□□□ -0.17
Ttc28Q80XJ3 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ttc28Q80XJ3 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ttc28Q80XJ3 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.01□□□□□ -0.17
Ttc28Q80XJ3 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ttc28Q80XJ3 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ttc28Q80XJ3 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ttc28Q80XJ3 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.01□□□□□ -0.17
Ttc28Q80XJ3 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.01□□□□□ -0.17
Ttc28Q80XJ3 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ttc28Q80XJ3 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ttc28Q80XJ3 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.01□□□□□ -0.17
Ttc28Q80XJ3 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ttc28Q80XJ3 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ttc28Q80XJ3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC14.01□□□□□ -0.17
Ttc28Q80XJ3 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ttc28Q80XJ3 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ttc28Q80XJ3 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ttc28Q80XJ3 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ttc28Q80XJ3 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ttc28Q80XJ3 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ttc28Q80XJ3 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ttc28Q80XJ3 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14□□□□□ -0.17
Ttc28Q80XJ3 Gm7506-201ENSMUST00000207758 815 ntBASIC14□□□□□ -0.17
Ttc28Q80XJ3 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ttc28Q80XJ3 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ttc28Q80XJ3 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ttc28Q80XJ3 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ttc28Q80XJ3 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ttc28Q80XJ3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ttc28Q80XJ3 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ttc28Q80XJ3 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ttc28Q80XJ3 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14□□□□□ -0.17
Ttc28Q80XJ3 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ttc28Q80XJ3 Gm15920-201ENSMUST00000118998 402 ntBASIC14□□□□□ -0.17
Ttc28Q80XJ3 Gm13418-201ENSMUST00000119097 944 ntBASIC14□□□□□ -0.17
Ttc28Q80XJ3 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ttc28Q80XJ3 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ttc28Q80XJ3 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ttc28Q80XJ3 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ttc28Q80XJ3 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Ttc28Q80XJ3 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ttc28Q80XJ3 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms