Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Vrk1Q80X41 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Vrk1Q80X41 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vrk1Q80X41 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vrk1Q80X41 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vrk1Q80X41 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vrk1Q80X41 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vrk1Q80X41 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vrk1Q80X41 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vrk1Q80X41 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vrk1Q80X41 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vrk1Q80X41 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vrk1Q80X41 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vrk1Q80X41 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.93■□□□□ 0.14
Vrk1Q80X41 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Vrk1Q80X41 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.93■□□□□ 0.14
Vrk1Q80X41 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
Vrk1Q80X41 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.93■□□□□ 0.14
Vrk1Q80X41 Mzt1-203ENSMUST00000227948 952 ntBASIC15.93■□□□□ 0.14
Vrk1Q80X41 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vrk1Q80X41 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vrk1Q80X41 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Vrk1Q80X41 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vrk1Q80X41 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Vrk1Q80X41 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vrk1Q80X41 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vrk1Q80X41 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.93■□□□□ 0.14
Vrk1Q80X41 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vrk1Q80X41 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Vrk1Q80X41 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vrk1Q80X41 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vrk1Q80X41 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vrk1Q80X41 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vrk1Q80X41 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vrk1Q80X41 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vrk1Q80X41 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Vrk1Q80X41 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vrk1Q80X41 Gm12895-201ENSMUST00000122214 226 ntBASIC15.92■□□□□ 0.14
Vrk1Q80X41 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vrk1Q80X41 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vrk1Q80X41 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vrk1Q80X41 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vrk1Q80X41 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vrk1Q80X41 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Vrk1Q80X41 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vrk1Q80X41 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vrk1Q80X41 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vrk1Q80X41 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vrk1Q80X41 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vrk1Q80X41 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vrk1Q80X41 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.91■□□□□ 0.14
Vrk1Q80X41 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vrk1Q80X41 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vrk1Q80X41 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vrk1Q80X41 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vrk1Q80X41 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vrk1Q80X41 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Vrk1Q80X41 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vrk1Q80X41 Gm28659-201ENSMUST00000188013 759 ntBASIC15.91■□□□□ 0.14
Vrk1Q80X41 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vrk1Q80X41 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vrk1Q80X41 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.91■□□□□ 0.14
Vrk1Q80X41 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.91■□□□□ 0.14
Vrk1Q80X41 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vrk1Q80X41 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vrk1Q80X41 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.91■□□□□ 0.14
Vrk1Q80X41 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Vrk1Q80X41 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vrk1Q80X41 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vrk1Q80X41 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.91■□□□□ 0.14
Vrk1Q80X41 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vrk1Q80X41 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vrk1Q80X41 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.9■□□□□ 0.14
Vrk1Q80X41 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vrk1Q80X41 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vrk1Q80X41 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vrk1Q80X41 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vrk1Q80X41 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.9■□□□□ 0.14
Vrk1Q80X41 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vrk1Q80X41 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vrk1Q80X41 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vrk1Q80X41 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vrk1Q80X41 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Vrk1Q80X41 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.9■□□□□ 0.14
Vrk1Q80X41 Gm27459-201ENSMUST00000184860 107 ntBASIC15.9■□□□□ 0.14
Vrk1Q80X41 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vrk1Q80X41 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.9■□□□□ 0.14
Vrk1Q80X41 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vrk1Q80X41 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.9■□□□□ 0.14
Vrk1Q80X41 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vrk1Q80X41 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Vrk1Q80X41 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.9■□□□□ 0.14
Vrk1Q80X41 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.9■□□□□ 0.14
Vrk1Q80X41 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.9■□□□□ 0.14
Vrk1Q80X41 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Vrk1Q80X41 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vrk1Q80X41 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vrk1Q80X41 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vrk1Q80X41 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vrk1Q80X41 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms