Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3tc2Q80VA5 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3tc2Q80VA5 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC18.18■□□□□ 0.5
Sh3tc2Q80VA5 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.18■□□□□ 0.5
Sh3tc2Q80VA5 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3tc2Q80VA5 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.18■□□□□ 0.5
Sh3tc2Q80VA5 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3tc2Q80VA5 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3tc2Q80VA5 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3tc2Q80VA5 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3tc2Q80VA5 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Sh3tc2Q80VA5 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Sh3tc2Q80VA5 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3tc2Q80VA5 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Sh3tc2Q80VA5 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh3tc2Q80VA5 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh3tc2Q80VA5 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh3tc2Q80VA5 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.17■□□□□ 0.5
Sh3tc2Q80VA5 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sh3tc2Q80VA5 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sh3tc2Q80VA5 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sh3tc2Q80VA5 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.17■□□□□ 0.5
Sh3tc2Q80VA5 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh3tc2Q80VA5 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh3tc2Q80VA5 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sh3tc2Q80VA5 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.17■□□□□ 0.5
Sh3tc2Q80VA5 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh3tc2Q80VA5 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh3tc2Q80VA5 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh3tc2Q80VA5 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Sh3tc2Q80VA5 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh3tc2Q80VA5 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh3tc2Q80VA5 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Sh3tc2Q80VA5 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh3tc2Q80VA5 Gm18733-201ENSMUST00000173950 856 ntBASIC18.16■□□□□ 0.5
Sh3tc2Q80VA5 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Sh3tc2Q80VA5 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.16■□□□□ 0.5
Sh3tc2Q80VA5 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Sh3tc2Q80VA5 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh3tc2Q80VA5 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh3tc2Q80VA5 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Sh3tc2Q80VA5 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sh3tc2Q80VA5 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sh3tc2Q80VA5 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh3tc2Q80VA5 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3tc2Q80VA5 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3tc2Q80VA5 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3tc2Q80VA5 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Sh3tc2Q80VA5 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3tc2Q80VA5 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3tc2Q80VA5 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3tc2Q80VA5 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.15■□□□□ 0.5
Sh3tc2Q80VA5 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3tc2Q80VA5 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.15■□□□□ 0.5
Sh3tc2Q80VA5 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3tc2Q80VA5 Gm10052-201ENSMUST00000168019 960 ntBASIC18.15■□□□□ 0.5
Sh3tc2Q80VA5 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.15■□□□□ 0.5
Sh3tc2Q80VA5 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3tc2Q80VA5 Gm7729-201ENSMUST00000050143 801 ntBASIC18.15■□□□□ 0.5
Sh3tc2Q80VA5 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3tc2Q80VA5 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3tc2Q80VA5 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3tc2Q80VA5 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3tc2Q80VA5 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3tc2Q80VA5 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3tc2Q80VA5 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.14■□□□□ 0.5
Sh3tc2Q80VA5 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Sh3tc2Q80VA5 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Sh3tc2Q80VA5 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.14■□□□□ 0.5
Sh3tc2Q80VA5 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Sh3tc2Q80VA5 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh3tc2Q80VA5 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh3tc2Q80VA5 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh3tc2Q80VA5 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh3tc2Q80VA5 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh3tc2Q80VA5 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sh3tc2Q80VA5 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Sh3tc2Q80VA5 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh3tc2Q80VA5 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sh3tc2Q80VA5 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.14■□□□□ 0.49
Sh3tc2Q80VA5 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Sh3tc2Q80VA5 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh3tc2Q80VA5 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh3tc2Q80VA5 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh3tc2Q80VA5 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh3tc2Q80VA5 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh3tc2Q80VA5 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh3tc2Q80VA5 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Sh3tc2Q80VA5 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh3tc2Q80VA5 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3tc2Q80VA5 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3tc2Q80VA5 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3tc2Q80VA5 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3tc2Q80VA5 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3tc2Q80VA5 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3tc2Q80VA5 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC18.13■□□□□ 0.49
Sh3tc2Q80VA5 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3tc2Q80VA5 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.13■□□□□ 0.49
Sh3tc2Q80VA5 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Sh3tc2Q80VA5 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms