Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn4bQ7M729 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.29■□□□□ 0.2
Scn4bQ7M729 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn4bQ7M729 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn4bQ7M729 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn4bQ7M729 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn4bQ7M729 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn4bQ7M729 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.29■□□□□ 0.2
Scn4bQ7M729 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn4bQ7M729 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Scn4bQ7M729 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Scn4bQ7M729 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Scn4bQ7M729 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn4bQ7M729 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn4bQ7M729 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn4bQ7M729 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn4bQ7M729 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Scn4bQ7M729 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.28■□□□□ 0.2
Scn4bQ7M729 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Scn4bQ7M729 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.28■□□□□ 0.2
Scn4bQ7M729 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Scn4bQ7M729 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Scn4bQ7M729 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn4bQ7M729 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Scn4bQ7M729 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn4bQ7M729 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.28■□□□□ 0.2
Scn4bQ7M729 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn4bQ7M729 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn4bQ7M729 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn4bQ7M729 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn4bQ7M729 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Scn4bQ7M729 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn4bQ7M729 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn4bQ7M729 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn4bQ7M729 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn4bQ7M729 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn4bQ7M729 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn4bQ7M729 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn4bQ7M729 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Scn4bQ7M729 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Scn4bQ7M729 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn4bQ7M729 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn4bQ7M729 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Scn4bQ7M729 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Scn4bQ7M729 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn4bQ7M729 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.27■□□□□ 0.19
Scn4bQ7M729 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Scn4bQ7M729 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scn4bQ7M729 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn4bQ7M729 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn4bQ7M729 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.26■□□□□ 0.19
Scn4bQ7M729 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn4bQ7M729 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn4bQ7M729 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn4bQ7M729 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Scn4bQ7M729 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn4bQ7M729 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Scn4bQ7M729 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn4bQ7M729 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Scn4bQ7M729 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.26■□□□□ 0.19
Scn4bQ7M729 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn4bQ7M729 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Scn4bQ7M729 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn4bQ7M729 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn4bQ7M729 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.26■□□□□ 0.19
Scn4bQ7M729 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn4bQ7M729 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn4bQ7M729 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn4bQ7M729 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Scn4bQ7M729 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn4bQ7M729 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn4bQ7M729 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn4bQ7M729 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Scn4bQ7M729 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn4bQ7M729 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Scn4bQ7M729 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Scn4bQ7M729 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn4bQ7M729 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn4bQ7M729 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn4bQ7M729 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn4bQ7M729 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Scn4bQ7M729 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Scn4bQ7M729 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.25■□□□□ 0.19
Scn4bQ7M729 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.25■□□□□ 0.19
Scn4bQ7M729 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Scn4bQ7M729 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn4bQ7M729 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn4bQ7M729 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn4bQ7M729 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn4bQ7M729 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn4bQ7M729 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Scn4bQ7M729 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn4bQ7M729 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Scn4bQ7M729 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Scn4bQ7M729 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Scn4bQ7M729 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn4bQ7M729 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn4bQ7M729 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Scn4bQ7M729 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn4bQ7M729 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms