Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sned1Q70E20 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sned1Q70E20 Mir6956-201ENSMUST00000183598 62 ntBASIC20.17■□□□□ 0.82
Sned1Q70E20 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sned1Q70E20 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Sned1Q70E20 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sned1Q70E20 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sned1Q70E20 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sned1Q70E20 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Sned1Q70E20 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sned1Q70E20 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Sned1Q70E20 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.16■□□□□ 0.82
Sned1Q70E20 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sned1Q70E20 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC20.16■□□□□ 0.82
Sned1Q70E20 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sned1Q70E20 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sned1Q70E20 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC20.16■□□□□ 0.82
Sned1Q70E20 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sned1Q70E20 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sned1Q70E20 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Sned1Q70E20 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sned1Q70E20 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sned1Q70E20 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sned1Q70E20 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sned1Q70E20 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sned1Q70E20 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sned1Q70E20 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sned1Q70E20 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sned1Q70E20 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sned1Q70E20 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sned1Q70E20 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sned1Q70E20 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.15■□□□□ 0.82
Sned1Q70E20 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sned1Q70E20 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sned1Q70E20 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sned1Q70E20 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sned1Q70E20 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sned1Q70E20 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sned1Q70E20 Gm11025-201ENSMUST00000140773 466 ntBASIC20.15■□□□□ 0.82
Sned1Q70E20 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC20.15■□□□□ 0.82
Sned1Q70E20 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sned1Q70E20 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC20.15■□□□□ 0.82
Sned1Q70E20 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Sned1Q70E20 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Sned1Q70E20 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Sned1Q70E20 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sned1Q70E20 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sned1Q70E20 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sned1Q70E20 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Sned1Q70E20 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Sned1Q70E20 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Sned1Q70E20 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Sned1Q70E20 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Sned1Q70E20 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Sned1Q70E20 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sned1Q70E20 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sned1Q70E20 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Sned1Q70E20 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sned1Q70E20 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC20.14■□□□□ 0.81
Sned1Q70E20 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sned1Q70E20 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sned1Q70E20 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Sned1Q70E20 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sned1Q70E20 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sned1Q70E20 Gm8784-201ENSMUST00000222096 1435 ntBASIC20.13■□□□□ 0.81
Sned1Q70E20 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sned1Q70E20 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC20.13■□□□□ 0.81
Sned1Q70E20 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sned1Q70E20 Gm37171-201ENSMUST00000192636 1185 ntBASIC20.13■□□□□ 0.81
Sned1Q70E20 AC159295.1-201ENSMUST00000225326 940 ntBASIC20.13■□□□□ 0.81
Sned1Q70E20 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sned1Q70E20 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sned1Q70E20 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Sned1Q70E20 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Sned1Q70E20 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sned1Q70E20 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sned1Q70E20 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Sned1Q70E20 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sned1Q70E20 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC20.12■□□□□ 0.81
Sned1Q70E20 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC20.12■□□□□ 0.81
Sned1Q70E20 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Sned1Q70E20 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Sned1Q70E20 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC20.12■□□□□ 0.81
Sned1Q70E20 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Sned1Q70E20 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sned1Q70E20 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Sned1Q70E20 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sned1Q70E20 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sned1Q70E20 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Sned1Q70E20 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sned1Q70E20 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC20.12■□□□□ 0.81
Sned1Q70E20 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Sned1Q70E20 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Sned1Q70E20 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sned1Q70E20 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.12■□□□□ 0.81
Sned1Q70E20 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sned1Q70E20 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sned1Q70E20 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC20.11■□□□□ 0.81
Sned1Q70E20 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC20.11■□□□□ 0.81
Sned1Q70E20 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms