Protein–RNA interactions for Protein: Q6ZWR6

Syne1, Nesprin-1, mousemouse

Predictions only

Length 8,799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1Q6ZWR6 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Syne1Q6ZWR6 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Syne1Q6ZWR6 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Syne1Q6ZWR6 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Syne1Q6ZWR6 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
Syne1Q6ZWR6 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Syne1Q6ZWR6 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Syne1Q6ZWR6 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Gm2651-201ENSMUST00000203560 838 ntBASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Gm45605-201ENSMUST00000210265 4269 ntBASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Ighv6-1-201ENSMUST00000193612 343 ntBASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Gm43073-201ENSMUST00000198200 1189 ntBASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Phf7-203ENSMUST00000226565 1971 ntBASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Gm11594-201ENSMUST00000122313 162 ntBASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Gm37025-201ENSMUST00000195159 829 ntBASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Syne1Q6ZWR6 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Syne1Q6ZWR6 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Syne1Q6ZWR6 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Syne1Q6ZWR6 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Syne1Q6ZWR6 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Syne1Q6ZWR6 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Syne1Q6ZWR6 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
Syne1Q6ZWR6 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Syne1Q6ZWR6 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Syne1Q6ZWR6 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Syne1Q6ZWR6 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Syne1Q6ZWR6 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Syne1Q6ZWR6 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Syne1Q6ZWR6 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC5.67□□□□□ -1.5
Syne1Q6ZWR6 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Syne1Q6ZWR6 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC5.67□□□□□ -1.5
Syne1Q6ZWR6 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Syne1Q6ZWR6 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Syne1Q6ZWR6 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Syne1Q6ZWR6 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Syne1Q6ZWR6 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC5.67□□□□□ -1.5
Syne1Q6ZWR6 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Syne1Q6ZWR6 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Syne1Q6ZWR6 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC5.67□□□□□ -1.5
Syne1Q6ZWR6 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Syne1Q6ZWR6 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Syne1Q6ZWR6 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Syne1Q6ZWR6 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Syne1Q6ZWR6 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms