Protein–RNA interactions for Protein: Q6TDU8

Casc1, Protein CASC1, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc1Q6TDU8 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Casc1Q6TDU8 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Casc1Q6TDU8 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Casc1Q6TDU8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Casc1Q6TDU8 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Casc1Q6TDU8 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Casc1Q6TDU8 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Casc1Q6TDU8 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Casc1Q6TDU8 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Casc1Q6TDU8 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Casc1Q6TDU8 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Casc1Q6TDU8 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Casc1Q6TDU8 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Casc1Q6TDU8 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Casc1Q6TDU8 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Casc1Q6TDU8 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
Casc1Q6TDU8 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Casc1Q6TDU8 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.99■□□□□ 0.79
Casc1Q6TDU8 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.99■□□□□ 0.79
Casc1Q6TDU8 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.99■□□□□ 0.79
Casc1Q6TDU8 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.99■□□□□ 0.79
Casc1Q6TDU8 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Casc1Q6TDU8 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Casc1Q6TDU8 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Casc1Q6TDU8 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Casc1Q6TDU8 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Casc1Q6TDU8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Casc1Q6TDU8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Casc1Q6TDU8 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Casc1Q6TDU8 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Casc1Q6TDU8 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Casc1Q6TDU8 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC19.98■□□□□ 0.79
Casc1Q6TDU8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Casc1Q6TDU8 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Casc1Q6TDU8 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Casc1Q6TDU8 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Casc1Q6TDU8 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Casc1Q6TDU8 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.98■□□□□ 0.79
Casc1Q6TDU8 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.98■□□□□ 0.79
Casc1Q6TDU8 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Casc1Q6TDU8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Casc1Q6TDU8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Casc1Q6TDU8 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Casc1Q6TDU8 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Casc1Q6TDU8 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.97■□□□□ 0.79
Casc1Q6TDU8 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Casc1Q6TDU8 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Casc1Q6TDU8 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Casc1Q6TDU8 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Casc1Q6TDU8 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Casc1Q6TDU8 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Casc1Q6TDU8 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.97■□□□□ 0.79
Casc1Q6TDU8 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.97■□□□□ 0.79
Casc1Q6TDU8 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Casc1Q6TDU8 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Casc1Q6TDU8 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Casc1Q6TDU8 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Casc1Q6TDU8 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Casc1Q6TDU8 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Casc1Q6TDU8 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Casc1Q6TDU8 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Casc1Q6TDU8 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Casc1Q6TDU8 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Casc1Q6TDU8 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Casc1Q6TDU8 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Casc1Q6TDU8 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Casc1Q6TDU8 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Casc1Q6TDU8 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Casc1Q6TDU8 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Casc1Q6TDU8 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
Casc1Q6TDU8 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.96■□□□□ 0.79
Casc1Q6TDU8 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.96■□□□□ 0.79
Casc1Q6TDU8 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Casc1Q6TDU8 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Casc1Q6TDU8 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Casc1Q6TDU8 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.96■□□□□ 0.79
Casc1Q6TDU8 Gm3375-201ENSMUST00000203929 796 ntBASIC19.96■□□□□ 0.79
Casc1Q6TDU8 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Casc1Q6TDU8 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Casc1Q6TDU8 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Casc1Q6TDU8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Casc1Q6TDU8 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Casc1Q6TDU8 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Casc1Q6TDU8 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Casc1Q6TDU8 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
Casc1Q6TDU8 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Casc1Q6TDU8 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Casc1Q6TDU8 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Casc1Q6TDU8 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Casc1Q6TDU8 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Casc1Q6TDU8 Gm20628-201ENSMUST00000177363 3215 ntBASIC19.95■□□□□ 0.78
Casc1Q6TDU8 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.95■□□□□ 0.78
Casc1Q6TDU8 Gm15565-201ENSMUST00000118890 427 ntBASIC19.95■□□□□ 0.78
Casc1Q6TDU8 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Casc1Q6TDU8 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.95■□□□□ 0.78
Casc1Q6TDU8 Mir8112-201ENSMUST00000184382 131 ntBASIC19.95■□□□□ 0.78
Casc1Q6TDU8 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Casc1Q6TDU8 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Casc1Q6TDU8 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Casc1Q6TDU8 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms