Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf220Q6PDX6 Gm18671-201ENSMUST00000214826 683 ntBASIC15.9■□□□□ 0.14
Rnf220Q6PDX6 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf220Q6PDX6 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf220Q6PDX6 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Rnf220Q6PDX6 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf220Q6PDX6 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf220Q6PDX6 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf220Q6PDX6 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf220Q6PDX6 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Rnf220Q6PDX6 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.9■□□□□ 0.14
Rnf220Q6PDX6 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf220Q6PDX6 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf220Q6PDX6 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.14
Rnf220Q6PDX6 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf220Q6PDX6 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf220Q6PDX6 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Rnf220Q6PDX6 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf220Q6PDX6 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf220Q6PDX6 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf220Q6PDX6 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf220Q6PDX6 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf220Q6PDX6 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.89■□□□□ 0.13
Rnf220Q6PDX6 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf220Q6PDX6 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Rnf220Q6PDX6 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC15.89■□□□□ 0.13
Rnf220Q6PDX6 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf220Q6PDX6 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf220Q6PDX6 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf220Q6PDX6 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf220Q6PDX6 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf220Q6PDX6 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf220Q6PDX6 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
Rnf220Q6PDX6 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf220Q6PDX6 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf220Q6PDX6 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.88■□□□□ 0.13
Rnf220Q6PDX6 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
Rnf220Q6PDX6 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Rnf220Q6PDX6 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.88■□□□□ 0.13
Rnf220Q6PDX6 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Rnf220Q6PDX6 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf220Q6PDX6 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf220Q6PDX6 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Rnf220Q6PDX6 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf220Q6PDX6 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf220Q6PDX6 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Rnf220Q6PDX6 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf220Q6PDX6 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf220Q6PDX6 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf220Q6PDX6 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf220Q6PDX6 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf220Q6PDX6 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf220Q6PDX6 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf220Q6PDX6 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf220Q6PDX6 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf220Q6PDX6 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf220Q6PDX6 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf220Q6PDX6 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf220Q6PDX6 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf220Q6PDX6 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Rnf220Q6PDX6 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf220Q6PDX6 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf220Q6PDX6 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Rnf220Q6PDX6 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf220Q6PDX6 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf220Q6PDX6 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Rnf220Q6PDX6 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.87■□□□□ 0.13
Rnf220Q6PDX6 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC15.87■□□□□ 0.13
Rnf220Q6PDX6 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf220Q6PDX6 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Rnf220Q6PDX6 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf220Q6PDX6 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
Rnf220Q6PDX6 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf220Q6PDX6 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf220Q6PDX6 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf220Q6PDX6 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf220Q6PDX6 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf220Q6PDX6 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf220Q6PDX6 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
Rnf220Q6PDX6 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC15.86■□□□□ 0.13
Rnf220Q6PDX6 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.86■□□□□ 0.13
Rnf220Q6PDX6 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf220Q6PDX6 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Rnf220Q6PDX6 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf220Q6PDX6 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf220Q6PDX6 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Rnf220Q6PDX6 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.86■□□□□ 0.13
Rnf220Q6PDX6 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf220Q6PDX6 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf220Q6PDX6 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf220Q6PDX6 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf220Q6PDX6 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf220Q6PDX6 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf220Q6PDX6 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.86■□□□□ 0.13
Rnf220Q6PDX6 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf220Q6PDX6 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC15.86■□□□□ 0.13
Rnf220Q6PDX6 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
Rnf220Q6PDX6 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf220Q6PDX6 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf220Q6PDX6 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms