Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ShbQ6PD21 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ShbQ6PD21 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
ShbQ6PD21 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ShbQ6PD21 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.07■□□□□ 0.48
ShbQ6PD21 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ShbQ6PD21 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ShbQ6PD21 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ShbQ6PD21 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ShbQ6PD21 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ShbQ6PD21 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.06■□□□□ 0.48
ShbQ6PD21 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ShbQ6PD21 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ShbQ6PD21 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
ShbQ6PD21 Gm27321-201ENSMUST00000185021 205 ntBASIC18.06■□□□□ 0.48
ShbQ6PD21 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
ShbQ6PD21 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ShbQ6PD21 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18.06■□□□□ 0.48
ShbQ6PD21 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ShbQ6PD21 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
ShbQ6PD21 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ShbQ6PD21 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ShbQ6PD21 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ShbQ6PD21 Gm11873-201ENSMUST00000117877 1304 ntBASIC18.05■□□□□ 0.48
ShbQ6PD21 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ShbQ6PD21 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.05■□□□□ 0.48
ShbQ6PD21 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.05■□□□□ 0.48
ShbQ6PD21 Gm9172-201ENSMUST00000212092 954 ntBASIC18.05■□□□□ 0.48
ShbQ6PD21 Gm7229-201ENSMUST00000214719 1007 ntBASIC18.05■□□□□ 0.48
ShbQ6PD21 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ShbQ6PD21 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC18.05■□□□□ 0.48
ShbQ6PD21 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.05■□□□□ 0.48
ShbQ6PD21 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.05■□□□□ 0.48
ShbQ6PD21 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
ShbQ6PD21 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
ShbQ6PD21 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ShbQ6PD21 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.04■□□□□ 0.48
ShbQ6PD21 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ShbQ6PD21 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.04■□□□□ 0.48
ShbQ6PD21 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ShbQ6PD21 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ShbQ6PD21 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.04■□□□□ 0.48
ShbQ6PD21 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ShbQ6PD21 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ShbQ6PD21 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC18.04■□□□□ 0.48
ShbQ6PD21 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.04■□□□□ 0.48
ShbQ6PD21 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ShbQ6PD21 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ShbQ6PD21 Mir6956-201ENSMUST00000183598 62 ntBASIC18.04■□□□□ 0.48
ShbQ6PD21 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ShbQ6PD21 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC18.04■□□□□ 0.48
ShbQ6PD21 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ShbQ6PD21 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ShbQ6PD21 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ShbQ6PD21 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ShbQ6PD21 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ShbQ6PD21 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.03■□□□□ 0.48
ShbQ6PD21 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.03■□□□□ 0.48
ShbQ6PD21 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ShbQ6PD21 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ShbQ6PD21 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
ShbQ6PD21 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ShbQ6PD21 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ShbQ6PD21 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ShbQ6PD21 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC18.03■□□□□ 0.48
ShbQ6PD21 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.03■□□□□ 0.48
ShbQ6PD21 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ShbQ6PD21 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC18.03■□□□□ 0.48
ShbQ6PD21 AC139382.1-201ENSMUST00000221402 498 ntBASIC18.03■□□□□ 0.48
ShbQ6PD21 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ShbQ6PD21 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ShbQ6PD21 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ShbQ6PD21 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ShbQ6PD21 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ShbQ6PD21 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ShbQ6PD21 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ShbQ6PD21 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ShbQ6PD21 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.02■□□□□ 0.48
ShbQ6PD21 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ShbQ6PD21 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ShbQ6PD21 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ShbQ6PD21 Gm11764-201ENSMUST00000120221 623 ntBASIC18.02■□□□□ 0.48
ShbQ6PD21 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
ShbQ6PD21 Gm37171-201ENSMUST00000192636 1185 ntBASIC18.02■□□□□ 0.48
ShbQ6PD21 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ShbQ6PD21 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
ShbQ6PD21 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ShbQ6PD21 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.02■□□□□ 0.47
ShbQ6PD21 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ShbQ6PD21 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ShbQ6PD21 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ShbQ6PD21 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
ShbQ6PD21 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ShbQ6PD21 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ShbQ6PD21 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ShbQ6PD21 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ShbQ6PD21 Gm5682-201ENSMUST00000173402 505 ntBASIC18.01■□□□□ 0.47
ShbQ6PD21 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
ShbQ6PD21 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
ShbQ6PD21 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms