Protein–RNA interactions for Protein: Q65CL1

Ctnna3, Catenin alpha-3, mousemouse

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctnna3Q65CL1 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ctnna3Q65CL1 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ctnna3Q65CL1 Gm7284-201ENSMUST00000131667 944 ntBASIC18.8■□□□□ 0.6
Ctnna3Q65CL1 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ctnna3Q65CL1 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ctnna3Q65CL1 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.8■□□□□ 0.6
Ctnna3Q65CL1 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ctnna3Q65CL1 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ctnna3Q65CL1 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ctnna3Q65CL1 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.8■□□□□ 0.6
Ctnna3Q65CL1 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ctnna3Q65CL1 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ctnna3Q65CL1 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ctnna3Q65CL1 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ctnna3Q65CL1 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ctnna3Q65CL1 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ctnna3Q65CL1 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ctnna3Q65CL1 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Ctnna3Q65CL1 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ctnna3Q65CL1 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ctnna3Q65CL1 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ctnna3Q65CL1 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Ctnna3Q65CL1 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ctnna3Q65CL1 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ctnna3Q65CL1 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.79■□□□□ 0.6
Ctnna3Q65CL1 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ctnna3Q65CL1 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ctnna3Q65CL1 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.79■□□□□ 0.6
Ctnna3Q65CL1 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.79■□□□□ 0.6
Ctnna3Q65CL1 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ctnna3Q65CL1 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ctnna3Q65CL1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ctnna3Q65CL1 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ctnna3Q65CL1 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ctnna3Q65CL1 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ctnna3Q65CL1 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.78■□□□□ 0.6
Ctnna3Q65CL1 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Ctnna3Q65CL1 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ctnna3Q65CL1 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ctnna3Q65CL1 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ctnna3Q65CL1 Gm16061-201ENSMUST00000122167 857 ntBASIC18.78■□□□□ 0.6
Ctnna3Q65CL1 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ctnna3Q65CL1 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ctnna3Q65CL1 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.78■□□□□ 0.6
Ctnna3Q65CL1 Il3ra-202ENSMUST00000223589 738 ntBASIC18.78■□□□□ 0.6
Ctnna3Q65CL1 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ctnna3Q65CL1 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ctnna3Q65CL1 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ctnna3Q65CL1 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ctnna3Q65CL1 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ctnna3Q65CL1 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ctnna3Q65CL1 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ctnna3Q65CL1 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ctnna3Q65CL1 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.77■□□□□ 0.6
Ctnna3Q65CL1 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ctnna3Q65CL1 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ctnna3Q65CL1 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ctnna3Q65CL1 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Ctnna3Q65CL1 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ctnna3Q65CL1 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ctnna3Q65CL1 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ctnna3Q65CL1 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ctnna3Q65CL1 Gm13474-201ENSMUST00000122466 815 ntBASIC18.77■□□□□ 0.6
Ctnna3Q65CL1 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ctnna3Q65CL1 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Ctnna3Q65CL1 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.77■□□□□ 0.6
Ctnna3Q65CL1 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Ctnna3Q65CL1 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Ctnna3Q65CL1 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ctnna3Q65CL1 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Ctnna3Q65CL1 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ctnna3Q65CL1 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Ctnna3Q65CL1 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ctnna3Q65CL1 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ctnna3Q65CL1 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ctnna3Q65CL1 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ctnna3Q65CL1 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ctnna3Q65CL1 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Ctnna3Q65CL1 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ctnna3Q65CL1 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ctnna3Q65CL1 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ctnna3Q65CL1 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ctnna3Q65CL1 Gm17971-201ENSMUST00000190239 806 ntBASIC18.76■□□□□ 0.59
Ctnna3Q65CL1 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.76■□□□□ 0.59
Ctnna3Q65CL1 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ctnna3Q65CL1 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ctnna3Q65CL1 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.76■□□□□ 0.59
Ctnna3Q65CL1 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ctnna3Q65CL1 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ctnna3Q65CL1 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ctnna3Q65CL1 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ctnna3Q65CL1 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ctnna3Q65CL1 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ctnna3Q65CL1 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ctnna3Q65CL1 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ctnna3Q65CL1 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Ctnna3Q65CL1 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Ctnna3Q65CL1 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ctnna3Q65CL1 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.75■□□□□ 0.59
Ctnna3Q65CL1 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms