Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Clcn1Q64347 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clcn1Q64347 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Clcn1Q64347 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clcn1Q64347 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clcn1Q64347 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clcn1Q64347 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Clcn1Q64347 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clcn1Q64347 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC21.09■□□□□ 0.97
Clcn1Q64347 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC21.09■□□□□ 0.97
Clcn1Q64347 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clcn1Q64347 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clcn1Q64347 Gm12644-201ENSMUST00000119935 606 ntBASIC21.09■□□□□ 0.97
Clcn1Q64347 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
Clcn1Q64347 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC21.09■□□□□ 0.97
Clcn1Q64347 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clcn1Q64347 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clcn1Q64347 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clcn1Q64347 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clcn1Q64347 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Clcn1Q64347 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clcn1Q64347 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Clcn1Q64347 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clcn1Q64347 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Clcn1Q64347 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Clcn1Q64347 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Clcn1Q64347 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Clcn1Q64347 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Clcn1Q64347 Gm15372-201ENSMUST00000120729 834 ntBASIC21.08■□□□□ 0.97
Clcn1Q64347 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Clcn1Q64347 Gm18733-201ENSMUST00000173950 856 ntBASIC21.08■□□□□ 0.97
Clcn1Q64347 Gm27867-201ENSMUST00000184778 125 ntBASIC21.08■□□□□ 0.97
Clcn1Q64347 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Clcn1Q64347 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC21.08■□□□□ 0.97
Clcn1Q64347 AC160338.1-201ENSMUST00000214232 705 ntBASIC21.08■□□□□ 0.97
Clcn1Q64347 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC21.08■□□□□ 0.97
Clcn1Q64347 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Clcn1Q64347 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Clcn1Q64347 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC21.08■□□□□ 0.96
Clcn1Q64347 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Clcn1Q64347 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clcn1Q64347 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clcn1Q64347 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clcn1Q64347 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clcn1Q64347 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clcn1Q64347 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clcn1Q64347 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Clcn1Q64347 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clcn1Q64347 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Clcn1Q64347 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clcn1Q64347 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Clcn1Q64347 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clcn1Q64347 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC21.07■□□□□ 0.96
Clcn1Q64347 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Clcn1Q64347 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC21.07■□□□□ 0.96
Clcn1Q64347 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC21.07■□□□□ 0.96
Clcn1Q64347 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clcn1Q64347 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clcn1Q64347 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clcn1Q64347 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clcn1Q64347 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Clcn1Q64347 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn1Q64347 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Clcn1Q64347 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn1Q64347 Gm29707-201ENSMUST00000196325 491 ntBASIC21.06■□□□□ 0.96
Clcn1Q64347 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn1Q64347 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn1Q64347 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn1Q64347 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC21.06■□□□□ 0.96
Clcn1Q64347 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn1Q64347 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn1Q64347 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clcn1Q64347 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Clcn1Q64347 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC21.05■□□□□ 0.96
Clcn1Q64347 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC21.05■□□□□ 0.96
Clcn1Q64347 AC108846.1-201ENSMUST00000214531 513 ntBASIC21.05■□□□□ 0.96
Clcn1Q64347 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC21.05■□□□□ 0.96
Clcn1Q64347 Gm6296-201ENSMUST00000222599 943 ntBASIC21.05■□□□□ 0.96
Clcn1Q64347 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clcn1Q64347 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clcn1Q64347 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clcn1Q64347 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clcn1Q64347 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clcn1Q64347 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC21.04■□□□□ 0.96
Clcn1Q64347 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clcn1Q64347 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Clcn1Q64347 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clcn1Q64347 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Clcn1Q64347 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC21.04■□□□□ 0.96
Clcn1Q64347 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clcn1Q64347 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clcn1Q64347 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
Clcn1Q64347 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Clcn1Q64347 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clcn1Q64347 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC21.04■□□□□ 0.96
Clcn1Q64347 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Clcn1Q64347 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clcn1Q64347 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Clcn1Q64347 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC21.04■□□□□ 0.96
Clcn1Q64347 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms