Protein–RNA interactions for Protein: Q62280

Ss18, Protein SSXT, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18Q62280 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ss18Q62280 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.37□□□□□ -0.43
Ss18Q62280 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ss18Q62280 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC12.37□□□□□ -0.43
Ss18Q62280 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC12.37□□□□□ -0.43
Ss18Q62280 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC12.37□□□□□ -0.43
Ss18Q62280 CT025689.6-201ENSMUST00000224991 1104 ntBASIC12.37□□□□□ -0.43
Ss18Q62280 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ss18Q62280 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ss18Q62280 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Ss18Q62280 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ss18Q62280 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ss18Q62280 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ss18Q62280 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ss18Q62280 CT010478.1-201ENSMUST00000220747 2787 ntBASIC12.37□□□□□ -0.43
Ss18Q62280 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ss18Q62280 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ss18Q62280 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.37□□□□□ -0.43
Ss18Q62280 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ss18Q62280 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ss18Q62280 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ss18Q62280 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ss18Q62280 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ss18Q62280 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Ss18Q62280 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ss18Q62280 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC12.36□□□□□ -0.43
Ss18Q62280 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ss18Q62280 Gm26596-201ENSMUST00000180464 2655 ntBASIC12.36□□□□□ -0.43
Ss18Q62280 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ss18Q62280 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ss18Q62280 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ss18Q62280 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC12.36□□□□□ -0.43
Ss18Q62280 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ss18Q62280 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ss18Q62280 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ss18Q62280 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Ss18Q62280 Gm18666-201ENSMUST00000190039 958 ntBASIC12.36□□□□□ -0.43
Ss18Q62280 Gm5297-201ENSMUST00000198555 1171 ntBASIC12.36□□□□□ -0.43
Ss18Q62280 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Ss18Q62280 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ss18Q62280 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ss18Q62280 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ss18Q62280 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ss18Q62280 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ss18Q62280 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ss18Q62280 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ss18Q62280 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ss18Q62280 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ss18Q62280 Gm5421-201ENSMUST00000181698 2354 ntBASIC12.36□□□□□ -0.43
Ss18Q62280 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ss18Q62280 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ss18Q62280 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ss18Q62280 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC12.36□□□□□ -0.43
Ss18Q62280 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Ss18Q62280 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ss18Q62280 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ss18Q62280 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ss18Q62280 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ss18Q62280 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ss18Q62280 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ss18Q62280 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ss18Q62280 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC12.35□□□□□ -0.43
Ss18Q62280 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ss18Q62280 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ss18Q62280 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ss18Q62280 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ss18Q62280 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ss18Q62280 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ss18Q62280 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Ss18Q62280 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Ss18Q62280 Gm12382-201ENSMUST00000122005 922 ntBASIC12.35□□□□□ -0.43
Ss18Q62280 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC12.35□□□□□ -0.43
Ss18Q62280 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ss18Q62280 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ss18Q62280 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ss18Q62280 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ss18Q62280 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ss18Q62280 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ss18Q62280 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ss18Q62280 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ss18Q62280 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ss18Q62280 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Ss18Q62280 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ss18Q62280 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ss18Q62280 Gm19721-201ENSMUST00000195284 1764 ntBASIC12.35□□□□□ -0.43
Ss18Q62280 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ss18Q62280 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ss18Q62280 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ss18Q62280 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ss18Q62280 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ss18Q62280 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ss18Q62280 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ss18Q62280 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ss18Q62280 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ss18Q62280 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ss18Q62280 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ss18Q62280 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ss18Q62280 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ss18Q62280 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ss18Q62280 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms