Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Six1Q62231 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Six1Q62231 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Six1Q62231 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Six1Q62231 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Six1Q62231 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Six1Q62231 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Six1Q62231 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Six1Q62231 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Six1Q62231 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Six1Q62231 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Six1Q62231 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Six1Q62231 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Six1Q62231 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Six1Q62231 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Six1Q62231 Odf3b-204ENSMUST00000227834 930 ntBASIC17.14■□□□□ 0.33
Six1Q62231 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Six1Q62231 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Six1Q62231 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Six1Q62231 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Six1Q62231 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Six1Q62231 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Six1Q62231 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Six1Q62231 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Six1Q62231 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Six1Q62231 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Six1Q62231 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Six1Q62231 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Six1Q62231 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Six1Q62231 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Six1Q62231 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Six1Q62231 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Six1Q62231 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Six1Q62231 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.13■□□□□ 0.33
Six1Q62231 Gm13168-201ENSMUST00000121771 632 ntBASIC17.13■□□□□ 0.33
Six1Q62231 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Six1Q62231 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Six1Q62231 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Six1Q62231 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Six1Q62231 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Six1Q62231 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Six1Q62231 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Six1Q62231 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Six1Q62231 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Six1Q62231 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Six1Q62231 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Six1Q62231 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Six1Q62231 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.12■□□□□ 0.33
Six1Q62231 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Six1Q62231 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Six1Q62231 Gm715-201ENSMUST00000117865 831 ntBASIC17.12■□□□□ 0.33
Six1Q62231 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.12■□□□□ 0.33
Six1Q62231 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.12■□□□□ 0.33
Six1Q62231 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Six1Q62231 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.12■□□□□ 0.33
Six1Q62231 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.12■□□□□ 0.33
Six1Q62231 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.12■□□□□ 0.33
Six1Q62231 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Six1Q62231 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Six1Q62231 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Six1Q62231 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Six1Q62231 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.12■□□□□ 0.33
Six1Q62231 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Six1Q62231 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Six1Q62231 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Six1Q62231 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Six1Q62231 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.12■□□□□ 0.33
Six1Q62231 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Six1Q62231 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Six1Q62231 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Six1Q62231 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Six1Q62231 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Six1Q62231 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Six1Q62231 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.11■□□□□ 0.33
Six1Q62231 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Six1Q62231 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Six1Q62231 Gm21814-202ENSMUST00000203277 873 ntBASIC17.11■□□□□ 0.33
Six1Q62231 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.11■□□□□ 0.33
Six1Q62231 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Six1Q62231 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Six1Q62231 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Six1Q62231 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Six1Q62231 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Six1Q62231 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.11■□□□□ 0.33
Six1Q62231 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Six1Q62231 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.11■□□□□ 0.33
Six1Q62231 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Six1Q62231 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Six1Q62231 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Six1Q62231 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Six1Q62231 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Six1Q62231 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.1■□□□□ 0.33
Six1Q62231 Gm13186-201ENSMUST00000118031 316 ntBASIC17.1■□□□□ 0.33
Six1Q62231 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.1■□□□□ 0.33
Six1Q62231 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Six1Q62231 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Six1Q62231 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Six1Q62231 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Six1Q62231 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Six1Q62231 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms