Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn9aQ62205 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC19.67■□□□□ 0.74
Scn9aQ62205 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Scn9aQ62205 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn9aQ62205 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn9aQ62205 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.66■□□□□ 0.74
Scn9aQ62205 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn9aQ62205 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC19.66■□□□□ 0.74
Scn9aQ62205 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC19.66■□□□□ 0.74
Scn9aQ62205 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Scn9aQ62205 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Scn9aQ62205 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC19.66■□□□□ 0.74
Scn9aQ62205 AC090659.1-201ENSMUST00000224334 768 ntBASIC19.66■□□□□ 0.74
Scn9aQ62205 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Scn9aQ62205 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn9aQ62205 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn9aQ62205 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.66■□□□□ 0.74
Scn9aQ62205 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn9aQ62205 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn9aQ62205 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn9aQ62205 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.66■□□□□ 0.74
Scn9aQ62205 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Scn9aQ62205 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn9aQ62205 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.66■□□□□ 0.74
Scn9aQ62205 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Scn9aQ62205 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn9aQ62205 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Scn9aQ62205 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn9aQ62205 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC19.66■□□□□ 0.74
Scn9aQ62205 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Scn9aQ62205 Gm4459-201ENSMUST00000118750 468 ntBASIC19.65■□□□□ 0.74
Scn9aQ62205 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Scn9aQ62205 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Scn9aQ62205 Gm11780-201ENSMUST00000136880 516 ntBASIC19.65■□□□□ 0.74
Scn9aQ62205 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn9aQ62205 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Scn9aQ62205 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Scn9aQ62205 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Scn9aQ62205 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.65■□□□□ 0.74
Scn9aQ62205 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn9aQ62205 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Scn9aQ62205 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC19.64■□□□□ 0.74
Scn9aQ62205 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC19.64■□□□□ 0.74
Scn9aQ62205 AC127349.1-201ENSMUST00000224590 266 ntBASIC19.64■□□□□ 0.74
Scn9aQ62205 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Scn9aQ62205 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Scn9aQ62205 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC19.64■□□□□ 0.74
Scn9aQ62205 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Scn9aQ62205 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.64■□□□□ 0.73
Scn9aQ62205 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn9aQ62205 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn9aQ62205 Gm5648-201ENSMUST00000122244 1587 ntBASIC19.64■□□□□ 0.73
Scn9aQ62205 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Scn9aQ62205 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Scn9aQ62205 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Scn9aQ62205 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn9aQ62205 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.64■□□□□ 0.73
Scn9aQ62205 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn9aQ62205 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn9aQ62205 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn9aQ62205 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Scn9aQ62205 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn9aQ62205 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.64■□□□□ 0.73
Scn9aQ62205 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn9aQ62205 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Scn9aQ62205 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC19.63■□□□□ 0.73
Scn9aQ62205 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC19.63■□□□□ 0.73
Scn9aQ62205 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn9aQ62205 Gm8349-201ENSMUST00000182720 1003 ntBASIC19.63■□□□□ 0.73
Scn9aQ62205 Gm8969-201ENSMUST00000199694 526 ntBASIC19.63■□□□□ 0.73
Scn9aQ62205 Ndufaf2-202ENSMUST00000223734 556 ntBASIC19.63■□□□□ 0.73
Scn9aQ62205 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn9aQ62205 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn9aQ62205 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.63■□□□□ 0.73
Scn9aQ62205 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Scn9aQ62205 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn9aQ62205 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn9aQ62205 Gm7507-201ENSMUST00000183053 1008 ntBASIC19.63■□□□□ 0.73
Scn9aQ62205 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.62■□□□□ 0.73
Scn9aQ62205 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.62■□□□□ 0.73
Scn9aQ62205 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn9aQ62205 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn9aQ62205 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn9aQ62205 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Scn9aQ62205 Gm8097-201ENSMUST00000117903 829 ntBASIC19.62■□□□□ 0.73
Scn9aQ62205 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Scn9aQ62205 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Scn9aQ62205 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Scn9aQ62205 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Scn9aQ62205 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC19.62■□□□□ 0.73
Scn9aQ62205 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Scn9aQ62205 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn9aQ62205 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Scn9aQ62205 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn9aQ62205 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Scn9aQ62205 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn9aQ62205 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC19.61■□□□□ 0.73
Scn9aQ62205 Chchd1-203ENSMUST00000224633 557 ntBASIC19.61■□□□□ 0.73
Scn9aQ62205 AC114585.2-202ENSMUST00000228094 426 ntBASIC19.61■□□□□ 0.73
Scn9aQ62205 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms