Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC18.7■□□□□ 0.58
Col11a1Q61245 AC159114.1-201ENSMUST00000220349 266 ntBASIC18.7■□□□□ 0.58
Col11a1Q61245 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC18.7■□□□□ 0.58
Col11a1Q61245 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col11a1Q61245 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col11a1Q61245 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col11a1Q61245 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col11a1Q61245 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col11a1Q61245 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col11a1Q61245 Gm4913-201ENSMUST00000117075 1290 ntBASIC18.7■□□□□ 0.58
Col11a1Q61245 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Col11a1Q61245 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.7■□□□□ 0.58
Col11a1Q61245 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col11a1Q61245 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Col11a1Q61245 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Col11a1Q61245 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col11a1Q61245 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col11a1Q61245 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col11a1Q61245 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col11a1Q61245 Gm11764-201ENSMUST00000120221 623 ntBASIC18.69■□□□□ 0.58
Col11a1Q61245 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.69■□□□□ 0.58
Col11a1Q61245 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col11a1Q61245 Gm44945-201ENSMUST00000206764 1187 ntBASIC18.69■□□□□ 0.58
Col11a1Q61245 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col11a1Q61245 AC158982.1-201ENSMUST00000228377 901 ntBASIC18.69■□□□□ 0.58
Col11a1Q61245 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col11a1Q61245 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col11a1Q61245 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Col11a1Q61245 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Col11a1Q61245 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col11a1Q61245 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col11a1Q61245 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.68■□□□□ 0.58
Col11a1Q61245 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col11a1Q61245 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.68■□□□□ 0.58
Col11a1Q61245 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col11a1Q61245 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC18.68■□□□□ 0.58
Col11a1Q61245 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col11a1Q61245 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col11a1Q61245 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col11a1Q61245 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col11a1Q61245 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col11a1Q61245 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col11a1Q61245 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col11a1Q61245 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Col11a1Q61245 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col11a1Q61245 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Col11a1Q61245 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col11a1Q61245 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col11a1Q61245 Gm14701-201ENSMUST00000117156 348 ntBASIC18.67■□□□□ 0.58
Col11a1Q61245 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col11a1Q61245 AC174742.1-201ENSMUST00000218272 304 ntBASIC18.67■□□□□ 0.58
Col11a1Q61245 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.67■□□□□ 0.58
Col11a1Q61245 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col11a1Q61245 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col11a1Q61245 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Col11a1Q61245 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col11a1Q61245 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Col11a1Q61245 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC18.67■□□□□ 0.58
Col11a1Q61245 Gm27646-201ENSMUST00000183989 110 ntBASIC18.67■□□□□ 0.58
Col11a1Q61245 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.67■□□□□ 0.58
Col11a1Q61245 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Col11a1Q61245 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col11a1Q61245 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC18.67■□□□□ 0.58
Col11a1Q61245 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Col11a1Q61245 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col11a1Q61245 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col11a1Q61245 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Col11a1Q61245 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18.66■□□□□ 0.58
Col11a1Q61245 Gm27321-201ENSMUST00000185021 205 ntBASIC18.66■□□□□ 0.58
Col11a1Q61245 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Col11a1Q61245 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col11a1Q61245 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col11a1Q61245 Gm15500-202ENSMUST00000071641 1019 ntBASIC18.66■□□□□ 0.58
Col11a1Q61245 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Col11a1Q61245 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.66■□□□□ 0.58
Col11a1Q61245 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col11a1Q61245 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.65■□□□□ 0.58
Col11a1Q61245 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col11a1Q61245 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col11a1Q61245 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col11a1Q61245 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col11a1Q61245 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col11a1Q61245 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Col11a1Q61245 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col11a1Q61245 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col11a1Q61245 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col11a1Q61245 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col11a1Q61245 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col11a1Q61245 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col11a1Q61245 AC159106.1-201ENSMUST00000224421 690 ntBASIC18.65■□□□□ 0.58
Col11a1Q61245 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col11a1Q61245 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col11a1Q61245 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col11a1Q61245 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col11a1Q61245 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Col11a1Q61245 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col11a1Q61245 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col11a1Q61245 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col11a1Q61245 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col11a1Q61245 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms