Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a4Q60857 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a4Q60857 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Slc6a4Q60857 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a4Q60857 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a4Q60857 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a4Q60857 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Slc6a4Q60857 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a4Q60857 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a4Q60857 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a4Q60857 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a4Q60857 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a4Q60857 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a4Q60857 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a4Q60857 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Slc6a4Q60857 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a4Q60857 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a4Q60857 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a4Q60857 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a4Q60857 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.11■□□□□ 0.33
Slc6a4Q60857 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a4Q60857 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a4Q60857 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a4Q60857 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a4Q60857 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a4Q60857 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.1■□□□□ 0.33
Slc6a4Q60857 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a4Q60857 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a4Q60857 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Slc6a4Q60857 Mir3081-201ENSMUST00000175305 84 ntBASIC17.1■□□□□ 0.33
Slc6a4Q60857 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a4Q60857 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a4Q60857 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Slc6a4Q60857 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a4Q60857 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a4Q60857 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a4Q60857 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a4Q60857 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Slc6a4Q60857 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a4Q60857 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Slc6a4Q60857 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a4Q60857 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a4Q60857 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a4Q60857 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a4Q60857 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a4Q60857 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Slc6a4Q60857 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Slc6a4Q60857 Gm27357-201ENSMUST00000183754 135 ntBASIC17.09■□□□□ 0.33
Slc6a4Q60857 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.09■□□□□ 0.33
Slc6a4Q60857 Gm18669-201ENSMUST00000216049 778 ntBASIC17.09■□□□□ 0.33
Slc6a4Q60857 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.09■□□□□ 0.33
Slc6a4Q60857 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.09■□□□□ 0.33
Slc6a4Q60857 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a4Q60857 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a4Q60857 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a4Q60857 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a4Q60857 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Slc6a4Q60857 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a4Q60857 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a4Q60857 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Slc6a4Q60857 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.08■□□□□ 0.33
Slc6a4Q60857 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
Slc6a4Q60857 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Slc6a4Q60857 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Slc6a4Q60857 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Slc6a4Q60857 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Slc6a4Q60857 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Slc6a4Q60857 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.08■□□□□ 0.33
Slc6a4Q60857 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Slc6a4Q60857 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.08■□□□□ 0.33
Slc6a4Q60857 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Slc6a4Q60857 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Slc6a4Q60857 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Slc6a4Q60857 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a4Q60857 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a4Q60857 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a4Q60857 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a4Q60857 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Slc6a4Q60857 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.08■□□□□ 0.32
Slc6a4Q60857 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.08■□□□□ 0.32
Slc6a4Q60857 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a4Q60857 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a4Q60857 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Slc6a4Q60857 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Slc6a4Q60857 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Slc6a4Q60857 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a4Q60857 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a4Q60857 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.07■□□□□ 0.32
Slc6a4Q60857 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Slc6a4Q60857 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.07■□□□□ 0.32
Slc6a4Q60857 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a4Q60857 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.07■□□□□ 0.32
Slc6a4Q60857 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.07■□□□□ 0.32
Slc6a4Q60857 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a4Q60857 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a4Q60857 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Slc6a4Q60857 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a4Q60857 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a4Q60857 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a4Q60857 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms