Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col12a1Q60847 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col12a1Q60847 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col12a1Q60847 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col12a1Q60847 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col12a1Q60847 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col12a1Q60847 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.5■□□□□ 0.23
Col12a1Q60847 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.5■□□□□ 0.23
Col12a1Q60847 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col12a1Q60847 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col12a1Q60847 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.5■□□□□ 0.23
Col12a1Q60847 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col12a1Q60847 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col12a1Q60847 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col12a1Q60847 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.49■□□□□ 0.23
Col12a1Q60847 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col12a1Q60847 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col12a1Q60847 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.49■□□□□ 0.23
Col12a1Q60847 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col12a1Q60847 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col12a1Q60847 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Col12a1Q60847 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col12a1Q60847 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col12a1Q60847 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col12a1Q60847 Iqck-206ENSMUST00000208658 2891 ntBASIC16.49■□□□□ 0.23
Col12a1Q60847 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.49■□□□□ 0.23
Col12a1Q60847 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col12a1Q60847 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col12a1Q60847 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col12a1Q60847 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col12a1Q60847 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col12a1Q60847 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col12a1Q60847 Gm29707-201ENSMUST00000196325 491 ntBASIC16.48■□□□□ 0.23
Col12a1Q60847 Gm43767-201ENSMUST00000198933 381 ntBASIC16.48■□□□□ 0.23
Col12a1Q60847 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col12a1Q60847 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col12a1Q60847 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col12a1Q60847 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col12a1Q60847 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.48■□□□□ 0.23
Col12a1Q60847 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.48■□□□□ 0.23
Col12a1Q60847 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.48■□□□□ 0.23
Col12a1Q60847 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.48■□□□□ 0.23
Col12a1Q60847 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col12a1Q60847 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Col12a1Q60847 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col12a1Q60847 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col12a1Q60847 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col12a1Q60847 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.48■□□□□ 0.23
Col12a1Q60847 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.48■□□□□ 0.23
Col12a1Q60847 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col12a1Q60847 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col12a1Q60847 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col12a1Q60847 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Col12a1Q60847 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.47■□□□□ 0.23
Col12a1Q60847 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col12a1Q60847 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col12a1Q60847 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Col12a1Q60847 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col12a1Q60847 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.47■□□□□ 0.23
Col12a1Q60847 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col12a1Q60847 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col12a1Q60847 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.47■□□□□ 0.23
Col12a1Q60847 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Col12a1Q60847 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col12a1Q60847 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.47■□□□□ 0.23
Col12a1Q60847 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col12a1Q60847 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col12a1Q60847 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col12a1Q60847 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col12a1Q60847 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.46■□□□□ 0.23
Col12a1Q60847 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Col12a1Q60847 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col12a1Q60847 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Col12a1Q60847 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col12a1Q60847 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col12a1Q60847 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col12a1Q60847 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.46■□□□□ 0.23
Col12a1Q60847 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col12a1Q60847 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Col12a1Q60847 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col12a1Q60847 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.46■□□□□ 0.23
Col12a1Q60847 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col12a1Q60847 Gm11764-201ENSMUST00000120221 623 ntBASIC16.46■□□□□ 0.23
Col12a1Q60847 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.46■□□□□ 0.23
Col12a1Q60847 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.46■□□□□ 0.22
Col12a1Q60847 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col12a1Q60847 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Col12a1Q60847 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col12a1Q60847 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col12a1Q60847 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col12a1Q60847 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.45■□□□□ 0.22
Col12a1Q60847 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.45■□□□□ 0.22
Col12a1Q60847 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col12a1Q60847 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col12a1Q60847 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col12a1Q60847 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.45■□□□□ 0.22
Col12a1Q60847 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col12a1Q60847 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Col12a1Q60847 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.45■□□□□ 0.22
Col12a1Q60847 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms