Protein–RNA interactions for Protein: Q5SUQ9

Ctc1, CST complex subunit CTC1, mousemouse

Predictions only

Length 1,212 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1Q5SUQ9 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ctc1Q5SUQ9 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
Ctc1Q5SUQ9 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ctc1Q5SUQ9 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ctc1Q5SUQ9 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Ctc1Q5SUQ9 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ctc1Q5SUQ9 Gm9731-201ENSMUST00000209480 747 ntBASIC17.69■□□□□ 0.42
Ctc1Q5SUQ9 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.69■□□□□ 0.42
Ctc1Q5SUQ9 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ctc1Q5SUQ9 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ctc1Q5SUQ9 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ctc1Q5SUQ9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ctc1Q5SUQ9 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ctc1Q5SUQ9 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ctc1Q5SUQ9 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ctc1Q5SUQ9 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Ctc1Q5SUQ9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ctc1Q5SUQ9 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ctc1Q5SUQ9 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ctc1Q5SUQ9 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Ctc1Q5SUQ9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ctc1Q5SUQ9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ctc1Q5SUQ9 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ctc1Q5SUQ9 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ctc1Q5SUQ9 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ctc1Q5SUQ9 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.69■□□□□ 0.42
Ctc1Q5SUQ9 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.68■□□□□ 0.42
Ctc1Q5SUQ9 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ctc1Q5SUQ9 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ctc1Q5SUQ9 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ctc1Q5SUQ9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ctc1Q5SUQ9 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Ctc1Q5SUQ9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ctc1Q5SUQ9 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.68■□□□□ 0.42
Ctc1Q5SUQ9 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ctc1Q5SUQ9 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ctc1Q5SUQ9 Gm7638-201ENSMUST00000121348 967 ntBASIC17.68■□□□□ 0.42
Ctc1Q5SUQ9 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.68■□□□□ 0.42
Ctc1Q5SUQ9 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ctc1Q5SUQ9 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.68■□□□□ 0.42
Ctc1Q5SUQ9 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ctc1Q5SUQ9 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ctc1Q5SUQ9 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ctc1Q5SUQ9 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ctc1Q5SUQ9 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ctc1Q5SUQ9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ctc1Q5SUQ9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.68■□□□□ 0.42
Ctc1Q5SUQ9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ctc1Q5SUQ9 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctc1Q5SUQ9 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Ctc1Q5SUQ9 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctc1Q5SUQ9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctc1Q5SUQ9 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctc1Q5SUQ9 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ctc1Q5SUQ9 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.67■□□□□ 0.42
Ctc1Q5SUQ9 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctc1Q5SUQ9 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.67■□□□□ 0.42
Ctc1Q5SUQ9 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctc1Q5SUQ9 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctc1Q5SUQ9 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.67■□□□□ 0.42
Ctc1Q5SUQ9 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctc1Q5SUQ9 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ctc1Q5SUQ9 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ctc1Q5SUQ9 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Ctc1Q5SUQ9 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ctc1Q5SUQ9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.67■□□□□ 0.42
Ctc1Q5SUQ9 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ctc1Q5SUQ9 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctc1Q5SUQ9 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ctc1Q5SUQ9 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ctc1Q5SUQ9 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctc1Q5SUQ9 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctc1Q5SUQ9 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctc1Q5SUQ9 Gm7284-201ENSMUST00000131667 944 ntBASIC17.66■□□□□ 0.42
Ctc1Q5SUQ9 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ctc1Q5SUQ9 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.66■□□□□ 0.42
Ctc1Q5SUQ9 Il3ra-202ENSMUST00000223589 738 ntBASIC17.66■□□□□ 0.42
Ctc1Q5SUQ9 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctc1Q5SUQ9 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctc1Q5SUQ9 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.66■□□□□ 0.42
Ctc1Q5SUQ9 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctc1Q5SUQ9 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ctc1Q5SUQ9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ctc1Q5SUQ9 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctc1Q5SUQ9 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctc1Q5SUQ9 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctc1Q5SUQ9 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctc1Q5SUQ9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctc1Q5SUQ9 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctc1Q5SUQ9 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.65■□□□□ 0.42
Ctc1Q5SUQ9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctc1Q5SUQ9 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ctc1Q5SUQ9 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ctc1Q5SUQ9 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ctc1Q5SUQ9 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.65■□□□□ 0.42
Ctc1Q5SUQ9 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.65■□□□□ 0.42
Ctc1Q5SUQ9 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.65■□□□□ 0.42
Ctc1Q5SUQ9 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.65■□□□□ 0.42
Ctc1Q5SUQ9 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.65■□□□□ 0.42
Ctc1Q5SUQ9 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms