Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-2Q5R1I4 Gm7729-201ENSMUST00000050143 801 ntBASIC14.69□□□□□ -0.06
Trav6-2Q5R1I4 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-2Q5R1I4 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-2Q5R1I4 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-2Q5R1I4 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-2Q5R1I4 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-2Q5R1I4 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-2Q5R1I4 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-2Q5R1I4 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trav6-2Q5R1I4 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav6-2Q5R1I4 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav6-2Q5R1I4 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-2Q5R1I4 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-2Q5R1I4 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav6-2Q5R1I4 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.68□□□□□ -0.06
Trav6-2Q5R1I4 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-2Q5R1I4 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav6-2Q5R1I4 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.68□□□□□ -0.06
Trav6-2Q5R1I4 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-2Q5R1I4 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-2Q5R1I4 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-2Q5R1I4 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trav6-2Q5R1I4 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav6-2Q5R1I4 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-2Q5R1I4 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-2Q5R1I4 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-2Q5R1I4 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-2Q5R1I4 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-2Q5R1I4 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-2Q5R1I4 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-2Q5R1I4 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-2Q5R1I4 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-2Q5R1I4 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-2Q5R1I4 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-2Q5R1I4 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trav6-2Q5R1I4 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav6-2Q5R1I4 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-2Q5R1I4 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-2Q5R1I4 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-2Q5R1I4 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-2Q5R1I4 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-2Q5R1I4 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-2Q5R1I4 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-2Q5R1I4 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-2Q5R1I4 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav6-2Q5R1I4 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-2Q5R1I4 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-2Q5R1I4 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-2Q5R1I4 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-2Q5R1I4 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav6-2Q5R1I4 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-2Q5R1I4 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.66□□□□□ -0.06
Trav6-2Q5R1I4 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-2Q5R1I4 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.66□□□□□ -0.06
Trav6-2Q5R1I4 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.66□□□□□ -0.06
Trav6-2Q5R1I4 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav6-2Q5R1I4 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-2Q5R1I4 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.66□□□□□ -0.06
Trav6-2Q5R1I4 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.66□□□□□ -0.06
Trav6-2Q5R1I4 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-2Q5R1I4 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-2Q5R1I4 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-2Q5R1I4 Gm5953-201ENSMUST00000220644 2616 ntBASIC14.66□□□□□ -0.06
Trav6-2Q5R1I4 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-2Q5R1I4 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Trav6-2Q5R1I4 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Trav6-2Q5R1I4 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-2Q5R1I4 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-2Q5R1I4 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-2Q5R1I4 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-2Q5R1I4 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-2Q5R1I4 Gm13884-201ENSMUST00000118103 829 ntBASIC14.65□□□□□ -0.06
Trav6-2Q5R1I4 Gm12644-201ENSMUST00000119935 606 ntBASIC14.65□□□□□ -0.06
Trav6-2Q5R1I4 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.65□□□□□ -0.06
Trav6-2Q5R1I4 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav6-2Q5R1I4 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav6-2Q5R1I4 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-2Q5R1I4 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-2Q5R1I4 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trav6-2Q5R1I4 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-2Q5R1I4 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-2Q5R1I4 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-2Q5R1I4 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-2Q5R1I4 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-2Q5R1I4 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav6-2Q5R1I4 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trav6-2Q5R1I4 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-2Q5R1I4 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-2Q5R1I4 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-2Q5R1I4 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-2Q5R1I4 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav6-2Q5R1I4 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-2Q5R1I4 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav6-2Q5R1I4 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-2Q5R1I4 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-2Q5R1I4 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav6-2Q5R1I4 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-2Q5R1I4 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-2Q5R1I4 Gm13312-201ENSMUST00000119631 718 ntBASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms