Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Trav5d-4Q5R1F6 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav5d-4Q5R1F6 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Trav5d-4Q5R1F6 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav5d-4Q5R1F6 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trav5d-4Q5R1F6 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav5d-4Q5R1F6 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav5d-4Q5R1F6 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav5d-4Q5R1F6 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav5d-4Q5R1F6 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav5d-4Q5R1F6 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav5d-4Q5R1F6 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5d-4Q5R1F6 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5d-4Q5R1F6 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav5d-4Q5R1F6 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5d-4Q5R1F6 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5d-4Q5R1F6 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav5d-4Q5R1F6 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5d-4Q5R1F6 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5d-4Q5R1F6 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav5d-4Q5R1F6 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5d-4Q5R1F6 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.38□□□□□ -0.11
Trav5d-4Q5R1F6 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Trav5d-4Q5R1F6 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav5d-4Q5R1F6 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5d-4Q5R1F6 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5d-4Q5R1F6 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5d-4Q5R1F6 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5d-4Q5R1F6 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5d-4Q5R1F6 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5d-4Q5R1F6 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5d-4Q5R1F6 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5d-4Q5R1F6 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5d-4Q5R1F6 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5d-4Q5R1F6 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5d-4Q5R1F6 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5d-4Q5R1F6 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5d-4Q5R1F6 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5d-4Q5R1F6 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5d-4Q5R1F6 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5d-4Q5R1F6 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5d-4Q5R1F6 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trav5d-4Q5R1F6 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.37□□□□□ -0.11
Trav5d-4Q5R1F6 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.37□□□□□ -0.11
Trav5d-4Q5R1F6 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav5d-4Q5R1F6 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5d-4Q5R1F6 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5d-4Q5R1F6 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav5d-4Q5R1F6 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5d-4Q5R1F6 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav5d-4Q5R1F6 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.37□□□□□ -0.11
Trav5d-4Q5R1F6 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5d-4Q5R1F6 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5d-4Q5R1F6 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5d-4Q5R1F6 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5d-4Q5R1F6 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5d-4Q5R1F6 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5d-4Q5R1F6 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trav5d-4Q5R1F6 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5d-4Q5R1F6 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Trav5d-4Q5R1F6 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.37□□□□□ -0.11
Trav5d-4Q5R1F6 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5d-4Q5R1F6 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5d-4Q5R1F6 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5d-4Q5R1F6 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5d-4Q5R1F6 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5d-4Q5R1F6 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
Trav5d-4Q5R1F6 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5d-4Q5R1F6 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trav5d-4Q5R1F6 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trav5d-4Q5R1F6 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5d-4Q5R1F6 Gm13216-201ENSMUST00000117145 591 ntBASIC14.36□□□□□ -0.11
Trav5d-4Q5R1F6 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5d-4Q5R1F6 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.36□□□□□ -0.11
Trav5d-4Q5R1F6 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5d-4Q5R1F6 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.36□□□□□ -0.11
Trav5d-4Q5R1F6 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5d-4Q5R1F6 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5d-4Q5R1F6 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5d-4Q5R1F6 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5d-4Q5R1F6 Haglr-201ENSMUST00000100000 2085 ntBASIC14.36□□□□□ -0.11
Trav5d-4Q5R1F6 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5d-4Q5R1F6 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5d-4Q5R1F6 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5d-4Q5R1F6 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5d-4Q5R1F6 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav5d-4Q5R1F6 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5d-4Q5R1F6 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5d-4Q5R1F6 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5d-4Q5R1F6 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5d-4Q5R1F6 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5d-4Q5R1F6 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav5d-4Q5R1F6 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5d-4Q5R1F6 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Trav5d-4Q5R1F6 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5d-4Q5R1F6 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5d-4Q5R1F6 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5d-4Q5R1F6 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5d-4Q5R1F6 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trav5d-4Q5R1F6 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms