Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Col27a1Q5QNQ9 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col27a1Q5QNQ9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Col27a1Q5QNQ9 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col27a1Q5QNQ9 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Col27a1Q5QNQ9 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col27a1Q5QNQ9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col27a1Q5QNQ9 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.12■□□□□ 0.17
Col27a1Q5QNQ9 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Col27a1Q5QNQ9 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col27a1Q5QNQ9 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col27a1Q5QNQ9 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col27a1Q5QNQ9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col27a1Q5QNQ9 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Col27a1Q5QNQ9 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Col27a1Q5QNQ9 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col27a1Q5QNQ9 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Col27a1Q5QNQ9 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC16.11■□□□□ 0.17
Col27a1Q5QNQ9 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col27a1Q5QNQ9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col27a1Q5QNQ9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col27a1Q5QNQ9 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.11■□□□□ 0.17
Col27a1Q5QNQ9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Col27a1Q5QNQ9 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
Col27a1Q5QNQ9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col27a1Q5QNQ9 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Col27a1Q5QNQ9 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col27a1Q5QNQ9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col27a1Q5QNQ9 AA543401-201ENSMUST00000164248 1269 ntBASIC16.1■□□□□ 0.17
Col27a1Q5QNQ9 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.1■□□□□ 0.17
Col27a1Q5QNQ9 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.1■□□□□ 0.17
Col27a1Q5QNQ9 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col27a1Q5QNQ9 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Col27a1Q5QNQ9 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col27a1Q5QNQ9 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col27a1Q5QNQ9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.1■□□□□ 0.17
Col27a1Q5QNQ9 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col27a1Q5QNQ9 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col27a1Q5QNQ9 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col27a1Q5QNQ9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Col27a1Q5QNQ9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col27a1Q5QNQ9 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col27a1Q5QNQ9 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col27a1Q5QNQ9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col27a1Q5QNQ9 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.1■□□□□ 0.17
Col27a1Q5QNQ9 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.1■□□□□ 0.17
Col27a1Q5QNQ9 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.1■□□□□ 0.17
Col27a1Q5QNQ9 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col27a1Q5QNQ9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col27a1Q5QNQ9 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col27a1Q5QNQ9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col27a1Q5QNQ9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.09■□□□□ 0.17
Col27a1Q5QNQ9 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col27a1Q5QNQ9 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Col27a1Q5QNQ9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Col27a1Q5QNQ9 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Col27a1Q5QNQ9 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.09■□□□□ 0.17
Col27a1Q5QNQ9 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Col27a1Q5QNQ9 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Col27a1Q5QNQ9 Gm23547-201ENSMUST00000158210 271 ntBASIC16.09■□□□□ 0.17
Col27a1Q5QNQ9 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col27a1Q5QNQ9 Gm27300-201ENSMUST00000184085 97 ntBASIC16.09■□□□□ 0.17
Col27a1Q5QNQ9 Gm27335-201ENSMUST00000184758 97 ntBASIC16.09■□□□□ 0.17
Col27a1Q5QNQ9 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.09■□□□□ 0.17
Col27a1Q5QNQ9 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Col27a1Q5QNQ9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col27a1Q5QNQ9 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Col27a1Q5QNQ9 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col27a1Q5QNQ9 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col27a1Q5QNQ9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col27a1Q5QNQ9 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col27a1Q5QNQ9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col27a1Q5QNQ9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col27a1Q5QNQ9 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.17
Col27a1Q5QNQ9 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.08■□□□□ 0.17
Col27a1Q5QNQ9 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.08■□□□□ 0.17
Col27a1Q5QNQ9 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Col27a1Q5QNQ9 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
Col27a1Q5QNQ9 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Col27a1Q5QNQ9 Gm44335-201ENSMUST00000196879 141 ntBASIC16.08■□□□□ 0.17
Col27a1Q5QNQ9 Gm44297-201ENSMUST00000198304 141 ntBASIC16.08■□□□□ 0.17
Col27a1Q5QNQ9 Gm44346-201ENSMUST00000198851 141 ntBASIC16.08■□□□□ 0.17
Col27a1Q5QNQ9 Gm43125-201ENSMUST00000201724 730 ntBASIC16.08■□□□□ 0.17
Col27a1Q5QNQ9 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Col27a1Q5QNQ9 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.08■□□□□ 0.17
Col27a1Q5QNQ9 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col27a1Q5QNQ9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col27a1Q5QNQ9 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col27a1Q5QNQ9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.08■□□□□ 0.16
Col27a1Q5QNQ9 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.08■□□□□ 0.16
Col27a1Q5QNQ9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col27a1Q5QNQ9 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col27a1Q5QNQ9 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Col27a1Q5QNQ9 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Col27a1Q5QNQ9 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Col27a1Q5QNQ9 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col27a1Q5QNQ9 Gm13597-201ENSMUST00000121239 375 ntBASIC16.08■□□□□ 0.16
Col27a1Q5QNQ9 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Col27a1Q5QNQ9 Gm17968-201ENSMUST00000194902 784 ntBASIC16.08■□□□□ 0.16
Col27a1Q5QNQ9 Gm20949-201ENSMUST00000206478 952 ntBASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms