Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Prpf38aQ4FK66 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.5■□□□□ 0.71
Prpf38aQ4FK66 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Prpf38aQ4FK66 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.5■□□□□ 0.71
Prpf38aQ4FK66 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Prpf38aQ4FK66 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Prpf38aQ4FK66 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Prpf38aQ4FK66 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.5■□□□□ 0.71
Prpf38aQ4FK66 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.5■□□□□ 0.71
Prpf38aQ4FK66 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Prpf38aQ4FK66 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Prpf38aQ4FK66 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Prpf38aQ4FK66 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf38aQ4FK66 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf38aQ4FK66 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.49■□□□□ 0.71
Prpf38aQ4FK66 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf38aQ4FK66 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf38aQ4FK66 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf38aQ4FK66 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf38aQ4FK66 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.49■□□□□ 0.71
Prpf38aQ4FK66 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Prpf38aQ4FK66 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf38aQ4FK66 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.49■□□□□ 0.71
Prpf38aQ4FK66 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Prpf38aQ4FK66 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf38aQ4FK66 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf38aQ4FK66 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Prpf38aQ4FK66 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf38aQ4FK66 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
Prpf38aQ4FK66 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Prpf38aQ4FK66 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf38aQ4FK66 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf38aQ4FK66 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC19.48■□□□□ 0.71
Prpf38aQ4FK66 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.48■□□□□ 0.71
Prpf38aQ4FK66 Umpk-ps-201ENSMUST00000211897 827 ntBASIC19.48■□□□□ 0.71
Prpf38aQ4FK66 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf38aQ4FK66 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf38aQ4FK66 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf38aQ4FK66 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Prpf38aQ4FK66 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf38aQ4FK66 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf38aQ4FK66 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf38aQ4FK66 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf38aQ4FK66 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Prpf38aQ4FK66 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.47■□□□□ 0.71
Prpf38aQ4FK66 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.47■□□□□ 0.71
Prpf38aQ4FK66 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf38aQ4FK66 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf38aQ4FK66 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf38aQ4FK66 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf38aQ4FK66 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Prpf38aQ4FK66 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf38aQ4FK66 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC19.47■□□□□ 0.71
Prpf38aQ4FK66 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Prpf38aQ4FK66 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.47■□□□□ 0.71
Prpf38aQ4FK66 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC19.47■□□□□ 0.71
Prpf38aQ4FK66 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Prpf38aQ4FK66 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf38aQ4FK66 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.47■□□□□ 0.71
Prpf38aQ4FK66 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf38aQ4FK66 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf38aQ4FK66 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf38aQ4FK66 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf38aQ4FK66 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf38aQ4FK66 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf38aQ4FK66 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf38aQ4FK66 Gm7153-201ENSMUST00000117092 455 ntBASIC19.46■□□□□ 0.71
Prpf38aQ4FK66 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Prpf38aQ4FK66 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf38aQ4FK66 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf38aQ4FK66 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Prpf38aQ4FK66 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf38aQ4FK66 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf38aQ4FK66 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf38aQ4FK66 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf38aQ4FK66 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf38aQ4FK66 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Prpf38aQ4FK66 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf38aQ4FK66 AC124569.2-201ENSMUST00000225998 818 ntBASIC19.45■□□□□ 0.7
Prpf38aQ4FK66 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Prpf38aQ4FK66 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf38aQ4FK66 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf38aQ4FK66 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Prpf38aQ4FK66 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf38aQ4FK66 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf38aQ4FK66 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf38aQ4FK66 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf38aQ4FK66 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.45■□□□□ 0.7
Prpf38aQ4FK66 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf38aQ4FK66 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf38aQ4FK66 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf38aQ4FK66 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf38aQ4FK66 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf38aQ4FK66 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf38aQ4FK66 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf38aQ4FK66 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf38aQ4FK66 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf38aQ4FK66 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.44■□□□□ 0.7
Prpf38aQ4FK66 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Prpf38aQ4FK66 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms