Protein–RNA interactions for Protein: Q3V0K9

Pls1, Plastin-1, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pls1Q3V0K9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pls1Q3V0K9 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pls1Q3V0K9 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.21■□□□□ 0.67
Pls1Q3V0K9 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pls1Q3V0K9 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pls1Q3V0K9 Gm24589-201ENSMUST00000116692 94 ntBASIC19.21■□□□□ 0.67
Pls1Q3V0K9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Pls1Q3V0K9 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC19.21■□□□□ 0.67
Pls1Q3V0K9 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Pls1Q3V0K9 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Pls1Q3V0K9 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.21■□□□□ 0.67
Pls1Q3V0K9 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pls1Q3V0K9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pls1Q3V0K9 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pls1Q3V0K9 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pls1Q3V0K9 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Pls1Q3V0K9 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pls1Q3V0K9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Pls1Q3V0K9 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pls1Q3V0K9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pls1Q3V0K9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pls1Q3V0K9 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pls1Q3V0K9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pls1Q3V0K9 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pls1Q3V0K9 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.2■□□□□ 0.66
Pls1Q3V0K9 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pls1Q3V0K9 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pls1Q3V0K9 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pls1Q3V0K9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pls1Q3V0K9 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Pls1Q3V0K9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pls1Q3V0K9 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Pls1Q3V0K9 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pls1Q3V0K9 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pls1Q3V0K9 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pls1Q3V0K9 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pls1Q3V0K9 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pls1Q3V0K9 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pls1Q3V0K9 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pls1Q3V0K9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pls1Q3V0K9 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Pls1Q3V0K9 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pls1Q3V0K9 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pls1Q3V0K9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.19■□□□□ 0.66
Pls1Q3V0K9 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pls1Q3V0K9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pls1Q3V0K9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Pls1Q3V0K9 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pls1Q3V0K9 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pls1Q3V0K9 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pls1Q3V0K9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pls1Q3V0K9 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Pls1Q3V0K9 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pls1Q3V0K9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Pls1Q3V0K9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Pls1Q3V0K9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pls1Q3V0K9 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pls1Q3V0K9 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pls1Q3V0K9 Gm44450-201ENSMUST00000199528 114 ntBASIC19.18■□□□□ 0.66
Pls1Q3V0K9 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.18■□□□□ 0.66
Pls1Q3V0K9 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC19.18■□□□□ 0.66
Pls1Q3V0K9 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pls1Q3V0K9 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pls1Q3V0K9 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pls1Q3V0K9 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.18■□□□□ 0.66
Pls1Q3V0K9 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Pls1Q3V0K9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Pls1Q3V0K9 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pls1Q3V0K9 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pls1Q3V0K9 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Pls1Q3V0K9 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pls1Q3V0K9 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pls1Q3V0K9 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pls1Q3V0K9 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.17■□□□□ 0.66
Pls1Q3V0K9 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pls1Q3V0K9 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC19.17■□□□□ 0.66
Pls1Q3V0K9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pls1Q3V0K9 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC19.17■□□□□ 0.66
Pls1Q3V0K9 AC133598.3-202ENSMUST00000224219 531 ntBASIC19.17■□□□□ 0.66
Pls1Q3V0K9 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pls1Q3V0K9 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pls1Q3V0K9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pls1Q3V0K9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pls1Q3V0K9 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pls1Q3V0K9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pls1Q3V0K9 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.16■□□□□ 0.66
Pls1Q3V0K9 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pls1Q3V0K9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pls1Q3V0K9 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pls1Q3V0K9 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Pls1Q3V0K9 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pls1Q3V0K9 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Pls1Q3V0K9 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
Pls1Q3V0K9 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pls1Q3V0K9 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pls1Q3V0K9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pls1Q3V0K9 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Pls1Q3V0K9 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pls1Q3V0K9 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pls1Q3V0K9 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms