Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC20.89■□□□□ 0.93
Col1a2Q01149 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col1a2Q01149 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col1a2Q01149 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Col1a2Q01149 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col1a2Q01149 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col1a2Q01149 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col1a2Q01149 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC20.88■□□□□ 0.93
Col1a2Q01149 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col1a2Q01149 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col1a2Q01149 Mir8098-201ENSMUST00000184011 137 ntBASIC20.88■□□□□ 0.93
Col1a2Q01149 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC20.88■□□□□ 0.93
Col1a2Q01149 AC159301.1-201ENSMUST00000225130 1182 ntBASIC20.88■□□□□ 0.93
Col1a2Q01149 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col1a2Q01149 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col1a2Q01149 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col1a2Q01149 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col1a2Q01149 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC20.88■□□□□ 0.93
Col1a2Q01149 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col1a2Q01149 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Col1a2Q01149 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col1a2Q01149 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col1a2Q01149 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col1a2Q01149 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col1a2Q01149 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.88■□□□□ 0.93
Col1a2Q01149 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col1a2Q01149 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Col1a2Q01149 Gm11841-201ENSMUST00000117060 1963 ntBASIC20.87■□□□□ 0.93
Col1a2Q01149 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col1a2Q01149 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Col1a2Q01149 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC20.87■□□□□ 0.93
Col1a2Q01149 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC20.87■□□□□ 0.93
Col1a2Q01149 Gm44454-201ENSMUST00000198541 138 ntBASIC20.87■□□□□ 0.93
Col1a2Q01149 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Col1a2Q01149 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col1a2Q01149 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.87■□□□□ 0.93
Col1a2Q01149 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col1a2Q01149 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Col1a2Q01149 Gm28659-201ENSMUST00000188013 759 ntBASIC20.86■□□□□ 0.93
Col1a2Q01149 Mzt1-203ENSMUST00000227948 952 ntBASIC20.86■□□□□ 0.93
Col1a2Q01149 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.86■□□□□ 0.93
Col1a2Q01149 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Col1a2Q01149 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Col1a2Q01149 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col1a2Q01149 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col1a2Q01149 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Col1a2Q01149 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col1a2Q01149 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC20.85■□□□□ 0.93
Col1a2Q01149 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Col1a2Q01149 Gm5864-201ENSMUST00000202263 970 ntBASIC20.85■□□□□ 0.93
Col1a2Q01149 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC20.85■□□□□ 0.93
Col1a2Q01149 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Col1a2Q01149 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC20.85■□□□□ 0.93
Col1a2Q01149 Cmtm5-203ENSMUST00000227441 610 ntBASIC20.85■□□□□ 0.93
Col1a2Q01149 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col1a2Q01149 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Col1a2Q01149 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col1a2Q01149 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Col1a2Q01149 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC20.85■□□□□ 0.93
Col1a2Q01149 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Col1a2Q01149 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col1a2Q01149 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col1a2Q01149 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Col1a2Q01149 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col1a2Q01149 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Col1a2Q01149 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col1a2Q01149 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC20.85■□□□□ 0.93
Col1a2Q01149 Gm36967-201ENSMUST00000193814 266 ntBASIC20.85■□□□□ 0.93
Col1a2Q01149 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC20.85■□□□□ 0.93
Col1a2Q01149 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col1a2Q01149 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col1a2Q01149 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col1a2Q01149 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
Col1a2Q01149 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Col1a2Q01149 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col1a2Q01149 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col1a2Q01149 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col1a2Q01149 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Col1a2Q01149 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Col1a2Q01149 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col1a2Q01149 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Col1a2Q01149 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col1a2Q01149 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col1a2Q01149 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
Col1a2Q01149 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col1a2Q01149 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC20.84■□□□□ 0.93
Col1a2Q01149 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
Col1a2Q01149 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC20.84■□□□□ 0.93
Col1a2Q01149 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC20.84■□□□□ 0.93
Col1a2Q01149 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col1a2Q01149 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Col1a2Q01149 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Col1a2Q01149 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Col1a2Q01149 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Col1a2Q01149 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col1a2Q01149 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col1a2Q01149 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col1a2Q01149 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col1a2Q01149 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col1a2Q01149 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms