Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cacna1aP97445 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cacna1aP97445 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cacna1aP97445 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Cacna1aP97445 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cacna1aP97445 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cacna1aP97445 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cacna1aP97445 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cacna1aP97445 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cacna1aP97445 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
Cacna1aP97445 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cacna1aP97445 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.4■□□□□ 0.06
Cacna1aP97445 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cacna1aP97445 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cacna1aP97445 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cacna1aP97445 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.4■□□□□ 0.06
Cacna1aP97445 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cacna1aP97445 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cacna1aP97445 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cacna1aP97445 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Cacna1aP97445 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cacna1aP97445 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cacna1aP97445 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cacna1aP97445 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cacna1aP97445 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Cacna1aP97445 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cacna1aP97445 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cacna1aP97445 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cacna1aP97445 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cacna1aP97445 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Cacna1aP97445 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.39■□□□□ 0.05
Cacna1aP97445 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.39■□□□□ 0.05
Cacna1aP97445 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cacna1aP97445 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cacna1aP97445 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cacna1aP97445 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cacna1aP97445 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cacna1aP97445 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cacna1aP97445 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.39■□□□□ 0.05
Cacna1aP97445 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cacna1aP97445 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cacna1aP97445 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cacna1aP97445 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cacna1aP97445 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cacna1aP97445 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cacna1aP97445 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.38■□□□□ 0.05
Cacna1aP97445 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cacna1aP97445 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Cacna1aP97445 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.38■□□□□ 0.05
Cacna1aP97445 Gm24513-201ENSMUST00000174964 138 ntBASIC15.38■□□□□ 0.05
Cacna1aP97445 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.38■□□□□ 0.05
Cacna1aP97445 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cacna1aP97445 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cacna1aP97445 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cacna1aP97445 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cacna1aP97445 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cacna1aP97445 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cacna1aP97445 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cacna1aP97445 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.38■□□□□ 0.05
Cacna1aP97445 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.38■□□□□ 0.05
Cacna1aP97445 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.38■□□□□ 0.05
Cacna1aP97445 Gm27321-201ENSMUST00000185021 205 ntBASIC15.38■□□□□ 0.05
Cacna1aP97445 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cacna1aP97445 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Cacna1aP97445 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cacna1aP97445 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.37■□□□□ 0.05
Cacna1aP97445 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cacna1aP97445 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cacna1aP97445 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cacna1aP97445 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cacna1aP97445 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cacna1aP97445 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cacna1aP97445 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Cacna1aP97445 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.37■□□□□ 0.05
Cacna1aP97445 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
Cacna1aP97445 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.37■□□□□ 0.05
Cacna1aP97445 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.37■□□□□ 0.05
Cacna1aP97445 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Cacna1aP97445 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cacna1aP97445 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cacna1aP97445 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cacna1aP97445 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Cacna1aP97445 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cacna1aP97445 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cacna1aP97445 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cacna1aP97445 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cacna1aP97445 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cacna1aP97445 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cacna1aP97445 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cacna1aP97445 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cacna1aP97445 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.36■□□□□ 0.05
Cacna1aP97445 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cacna1aP97445 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.36■□□□□ 0.05
Cacna1aP97445 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
Cacna1aP97445 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cacna1aP97445 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Cacna1aP97445 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cacna1aP97445 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Cacna1aP97445 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.36■□□□□ 0.05
Cacna1aP97445 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms