Protein–RNA interactions for Protein: P70279

Surf6, Surfeit locus protein 6, mousemouse

Known RBP Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Surf6P70279 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Surf6P70279 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Surf6P70279 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Surf6P70279 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Surf6P70279 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Surf6P70279 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Surf6P70279 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.42■□□□□ 0.38
Surf6P70279 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Surf6P70279 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Surf6P70279 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.42■□□□□ 0.38
Surf6P70279 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.42■□□□□ 0.38
Surf6P70279 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.42■□□□□ 0.38
Surf6P70279 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Surf6P70279 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Surf6P70279 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Surf6P70279 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Surf6P70279 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Surf6P70279 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Surf6P70279 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Surf6P70279 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Surf6P70279 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Surf6P70279 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Surf6P70279 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Surf6P70279 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Surf6P70279 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Surf6P70279 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Surf6P70279 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Surf6P70279 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Surf6P70279 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Surf6P70279 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.41■□□□□ 0.38
Surf6P70279 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Surf6P70279 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.41■□□□□ 0.38
Surf6P70279 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Surf6P70279 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Surf6P70279 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Surf6P70279 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Surf6P70279 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Surf6P70279 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Surf6P70279 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Surf6P70279 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Surf6P70279 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Surf6P70279 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Surf6P70279 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Surf6P70279 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.4■□□□□ 0.38
Surf6P70279 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Surf6P70279 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Surf6P70279 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Surf6P70279 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Surf6P70279 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Surf6P70279 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Surf6P70279 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Surf6P70279 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Surf6P70279 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Surf6P70279 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Surf6P70279 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Surf6P70279 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.4■□□□□ 0.38
Surf6P70279 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.4■□□□□ 0.38
Surf6P70279 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Surf6P70279 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Surf6P70279 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Surf6P70279 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Surf6P70279 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Surf6P70279 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Surf6P70279 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Surf6P70279 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Surf6P70279 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Surf6P70279 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Surf6P70279 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Surf6P70279 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Surf6P70279 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Surf6P70279 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Surf6P70279 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Surf6P70279 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Surf6P70279 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.39■□□□□ 0.37
Surf6P70279 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Surf6P70279 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.39■□□□□ 0.37
Surf6P70279 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Surf6P70279 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Surf6P70279 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Surf6P70279 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Surf6P70279 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Surf6P70279 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.39■□□□□ 0.37
Surf6P70279 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Surf6P70279 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Surf6P70279 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.38■□□□□ 0.37
Surf6P70279 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Surf6P70279 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Surf6P70279 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Surf6P70279 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Surf6P70279 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Surf6P70279 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Surf6P70279 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Surf6P70279 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.38■□□□□ 0.37
Surf6P70279 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.38■□□□□ 0.37
Surf6P70279 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Surf6P70279 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Surf6P70279 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.38■□□□□ 0.37
Surf6P70279 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Surf6P70279 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.38■□□□□ 0.37
Surf6P70279 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms