Protein–RNA interactions for Protein: P62069

Usp46, Ubiquitin carboxyl-terminal hydrolase 46, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp46P62069 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp46P62069 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp46P62069 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.49■□□□□ 0.39
Usp46P62069 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp46P62069 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp46P62069 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp46P62069 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp46P62069 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Usp46P62069 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp46P62069 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp46P62069 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Usp46P62069 Gm6623-201ENSMUST00000173570 544 ntBASIC17.49■□□□□ 0.39
Usp46P62069 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
Usp46P62069 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp46P62069 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp46P62069 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp46P62069 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.49■□□□□ 0.39
Usp46P62069 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.49■□□□□ 0.39
Usp46P62069 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.49■□□□□ 0.39
Usp46P62069 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp46P62069 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp46P62069 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp46P62069 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp46P62069 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp46P62069 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp46P62069 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Usp46P62069 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp46P62069 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.48■□□□□ 0.39
Usp46P62069 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Usp46P62069 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp46P62069 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp46P62069 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Usp46P62069 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Usp46P62069 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Usp46P62069 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.48■□□□□ 0.39
Usp46P62069 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp46P62069 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp46P62069 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp46P62069 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Usp46P62069 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp46P62069 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp46P62069 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp46P62069 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp46P62069 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp46P62069 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Usp46P62069 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp46P62069 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp46P62069 Gm11336-201ENSMUST00000118168 334 ntBASIC17.47■□□□□ 0.39
Usp46P62069 AC153937.1-201ENSMUST00000218734 412 ntBASIC17.47■□□□□ 0.39
Usp46P62069 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Usp46P62069 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Usp46P62069 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp46P62069 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.47■□□□□ 0.39
Usp46P62069 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Usp46P62069 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp46P62069 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp46P62069 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp46P62069 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp46P62069 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.47■□□□□ 0.39
Usp46P62069 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp46P62069 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp46P62069 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Usp46P62069 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Usp46P62069 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp46P62069 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp46P62069 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Usp46P62069 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp46P62069 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp46P62069 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Usp46P62069 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Usp46P62069 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Usp46P62069 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp46P62069 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.46■□□□□ 0.39
Usp46P62069 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp46P62069 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp46P62069 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Usp46P62069 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp46P62069 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp46P62069 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp46P62069 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp46P62069 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Usp46P62069 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Usp46P62069 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp46P62069 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp46P62069 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp46P62069 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.45■□□□□ 0.38
Usp46P62069 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp46P62069 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp46P62069 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp46P62069 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Usp46P62069 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp46P62069 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Usp46P62069 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.45■□□□□ 0.38
Usp46P62069 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp46P62069 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Usp46P62069 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Usp46P62069 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Usp46P62069 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp46P62069 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp46P62069 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms