Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3b6P59708 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.87□□□□□ -0.03
Sf3b6P59708 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Sf3b6P59708 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC14.87□□□□□ -0.03
Sf3b6P59708 Gm12669-201ENSMUST00000122162 1009 ntBASIC14.87□□□□□ -0.03
Sf3b6P59708 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC14.87□□□□□ -0.03
Sf3b6P59708 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3b6P59708 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3b6P59708 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3b6P59708 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Sf3b6P59708 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3b6P59708 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.87□□□□□ -0.03
Sf3b6P59708 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3b6P59708 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3b6P59708 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3b6P59708 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
Sf3b6P59708 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3b6P59708 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3b6P59708 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Sf3b6P59708 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3b6P59708 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3b6P59708 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3b6P59708 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3b6P59708 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b6P59708 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b6P59708 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b6P59708 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b6P59708 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b6P59708 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b6P59708 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b6P59708 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Sf3b6P59708 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b6P59708 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b6P59708 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC14.86□□□□□ -0.03
Sf3b6P59708 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b6P59708 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b6P59708 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b6P59708 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b6P59708 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b6P59708 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Sf3b6P59708 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b6P59708 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b6P59708 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b6P59708 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b6P59708 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b6P59708 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b6P59708 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b6P59708 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b6P59708 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b6P59708 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b6P59708 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b6P59708 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Sf3b6P59708 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b6P59708 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.85□□□□□ -0.03
Sf3b6P59708 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b6P59708 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b6P59708 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b6P59708 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b6P59708 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.85□□□□□ -0.03
Sf3b6P59708 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b6P59708 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Sf3b6P59708 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b6P59708 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b6P59708 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b6P59708 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.85□□□□□ -0.03
Sf3b6P59708 Gm15375-201ENSMUST00000119510 849 ntBASIC14.85□□□□□ -0.03
Sf3b6P59708 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b6P59708 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b6P59708 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Sf3b6P59708 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.85□□□□□ -0.03
Sf3b6P59708 Gm2559-201ENSMUST00000201323 363 ntBASIC14.85□□□□□ -0.03
Sf3b6P59708 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b6P59708 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b6P59708 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b6P59708 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b6P59708 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Sf3b6P59708 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b6P59708 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b6P59708 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b6P59708 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Sf3b6P59708 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b6P59708 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b6P59708 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b6P59708 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b6P59708 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b6P59708 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b6P59708 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b6P59708 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b6P59708 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Sf3b6P59708 Gm20049-201ENSMUST00000219950 730 ntBASIC14.84□□□□□ -0.03
Sf3b6P59708 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b6P59708 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b6P59708 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b6P59708 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b6P59708 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b6P59708 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Sf3b6P59708 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b6P59708 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b6P59708 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Sf3b6P59708 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms