Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Vps33bP59016 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vps33bP59016 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vps33bP59016 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vps33bP59016 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vps33bP59016 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.11■□□□□ 0.97
Vps33bP59016 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vps33bP59016 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vps33bP59016 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vps33bP59016 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vps33bP59016 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vps33bP59016 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Vps33bP59016 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vps33bP59016 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
Vps33bP59016 Gm4913-201ENSMUST00000117075 1290 ntBASIC21.11■□□□□ 0.97
Vps33bP59016 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC21.11■□□□□ 0.97
Vps33bP59016 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC21.11■□□□□ 0.97
Vps33bP59016 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
Vps33bP59016 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC21.11■□□□□ 0.97
Vps33bP59016 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Vps33bP59016 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vps33bP59016 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Vps33bP59016 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Vps33bP59016 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps33bP59016 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps33bP59016 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps33bP59016 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC21.1■□□□□ 0.97
Vps33bP59016 Gm25406-201ENSMUST00000157599 105 ntBASIC21.1■□□□□ 0.97
Vps33bP59016 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps33bP59016 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC21.1■□□□□ 0.97
Vps33bP59016 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Vps33bP59016 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
Vps33bP59016 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps33bP59016 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps33bP59016 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.09■□□□□ 0.97
Vps33bP59016 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
Vps33bP59016 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Vps33bP59016 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Vps33bP59016 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Vps33bP59016 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vps33bP59016 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Vps33bP59016 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Vps33bP59016 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Vps33bP59016 H2af-ps-201ENSMUST00000119066 295 ntBASIC21.09■□□□□ 0.97
Vps33bP59016 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Vps33bP59016 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vps33bP59016 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC21.09■□□□□ 0.97
Vps33bP59016 AC107711.5-202ENSMUST00000226429 702 ntBASIC21.09■□□□□ 0.97
Vps33bP59016 Gm15500-202ENSMUST00000071641 1019 ntBASIC21.09■□□□□ 0.97
Vps33bP59016 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Vps33bP59016 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vps33bP59016 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
Vps33bP59016 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
Vps33bP59016 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Vps33bP59016 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vps33bP59016 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vps33bP59016 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Vps33bP59016 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC21.08■□□□□ 0.97
Vps33bP59016 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC21.08■□□□□ 0.97
Vps33bP59016 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC21.08■□□□□ 0.97
Vps33bP59016 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Vps33bP59016 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC21.08■□□□□ 0.97
Vps33bP59016 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Vps33bP59016 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vps33bP59016 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vps33bP59016 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Vps33bP59016 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Vps33bP59016 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Vps33bP59016 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Vps33bP59016 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Vps33bP59016 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Vps33bP59016 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Vps33bP59016 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vps33bP59016 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC21.07■□□□□ 0.96
Vps33bP59016 Gm11025-201ENSMUST00000140773 466 ntBASIC21.07■□□□□ 0.96
Vps33bP59016 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC21.07■□□□□ 0.96
Vps33bP59016 AC174742.1-201ENSMUST00000218272 304 ntBASIC21.07■□□□□ 0.96
Vps33bP59016 AC159106.1-201ENSMUST00000224421 690 ntBASIC21.07■□□□□ 0.96
Vps33bP59016 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vps33bP59016 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Vps33bP59016 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vps33bP59016 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vps33bP59016 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vps33bP59016 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vps33bP59016 Gm11873-201ENSMUST00000117877 1304 ntBASIC21.06■□□□□ 0.96
Vps33bP59016 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Vps33bP59016 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vps33bP59016 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Vps33bP59016 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vps33bP59016 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vps33bP59016 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vps33bP59016 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC21.06■□□□□ 0.96
Vps33bP59016 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC21.06■□□□□ 0.96
Vps33bP59016 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC21.06■□□□□ 0.96
Vps33bP59016 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vps33bP59016 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vps33bP59016 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vps33bP59016 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vps33bP59016 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vps33bP59016 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms