Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tpm2P58774 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Tpm2P58774 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tpm2P58774 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tpm2P58774 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tpm2P58774 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tpm2P58774 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tpm2P58774 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tpm2P58774 Mir5133-201ENSMUST00000174955 77 ntBASIC19.24■□□□□ 0.67
Tpm2P58774 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.24■□□□□ 0.67
Tpm2P58774 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tpm2P58774 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.24■□□□□ 0.67
Tpm2P58774 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Tpm2P58774 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tpm2P58774 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Tpm2P58774 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tpm2P58774 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tpm2P58774 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC19.23■□□□□ 0.67
Tpm2P58774 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tpm2P58774 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tpm2P58774 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Tpm2P58774 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Tpm2P58774 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC19.23■□□□□ 0.67
Tpm2P58774 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Tpm2P58774 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.23■□□□□ 0.67
Tpm2P58774 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tpm2P58774 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tpm2P58774 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.23■□□□□ 0.67
Tpm2P58774 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Tpm2P58774 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tpm2P58774 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tpm2P58774 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tpm2P58774 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.23■□□□□ 0.67
Tpm2P58774 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tpm2P58774 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Tpm2P58774 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tpm2P58774 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tpm2P58774 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tpm2P58774 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tpm2P58774 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Tpm2P58774 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tpm2P58774 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.22■□□□□ 0.67
Tpm2P58774 Rab3c-203ENSMUST00000224180 967 ntBASIC19.22■□□□□ 0.67
Tpm2P58774 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tpm2P58774 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tpm2P58774 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tpm2P58774 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tpm2P58774 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tpm2P58774 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Tpm2P58774 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tpm2P58774 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Tpm2P58774 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tpm2P58774 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tpm2P58774 Zkscan3-208ENSMUST00000224820 5398 ntBASIC19.21■□□□□ 0.67
Tpm2P58774 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tpm2P58774 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tpm2P58774 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tpm2P58774 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tpm2P58774 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tpm2P58774 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.21■□□□□ 0.67
Tpm2P58774 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Tpm2P58774 Mir8112-201ENSMUST00000184382 131 ntBASIC19.21■□□□□ 0.67
Tpm2P58774 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tpm2P58774 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tpm2P58774 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Tpm2P58774 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tpm2P58774 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tpm2P58774 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Tpm2P58774 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tpm2P58774 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tpm2P58774 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
Tpm2P58774 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tpm2P58774 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tpm2P58774 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.2■□□□□ 0.66
Tpm2P58774 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tpm2P58774 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Tpm2P58774 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tpm2P58774 Gm26524-201ENSMUST00000192339 390 ntBASIC19.2■□□□□ 0.66
Tpm2P58774 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Tpm2P58774 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tpm2P58774 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Tpm2P58774 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.2■□□□□ 0.66
Tpm2P58774 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tpm2P58774 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Tpm2P58774 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tpm2P58774 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tpm2P58774 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tpm2P58774 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tpm2P58774 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tpm2P58774 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.19■□□□□ 0.66
Tpm2P58774 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tpm2P58774 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC19.19■□□□□ 0.66
Tpm2P58774 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tpm2P58774 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tpm2P58774 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tpm2P58774 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.19■□□□□ 0.66
Tpm2P58774 Gm8495-201ENSMUST00000188740 694 ntBASIC19.19■□□□□ 0.66
Tpm2P58774 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.19■□□□□ 0.66
Tpm2P58774 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tpm2P58774 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms