Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SmoP56726 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SmoP56726 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SmoP56726 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SmoP56726 Gm10819-201ENSMUST00000099988 561 ntBASIC16.81■□□□□ 0.28
SmoP56726 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SmoP56726 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SmoP56726 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SmoP56726 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SmoP56726 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SmoP56726 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SmoP56726 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SmoP56726 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SmoP56726 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SmoP56726 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SmoP56726 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SmoP56726 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SmoP56726 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SmoP56726 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SmoP56726 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SmoP56726 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SmoP56726 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SmoP56726 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SmoP56726 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SmoP56726 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SmoP56726 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SmoP56726 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SmoP56726 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.8■□□□□ 0.28
SmoP56726 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SmoP56726 Ank2-226ENSMUST00000189368 339 ntBASIC16.8■□□□□ 0.28
SmoP56726 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SmoP56726 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SmoP56726 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SmoP56726 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SmoP56726 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SmoP56726 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SmoP56726 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SmoP56726 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SmoP56726 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SmoP56726 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SmoP56726 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.79■□□□□ 0.28
SmoP56726 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.79■□□□□ 0.28
SmoP56726 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SmoP56726 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SmoP56726 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SmoP56726 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SmoP56726 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SmoP56726 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SmoP56726 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SmoP56726 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SmoP56726 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
SmoP56726 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SmoP56726 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.79■□□□□ 0.28
SmoP56726 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.79■□□□□ 0.28
SmoP56726 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SmoP56726 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SmoP56726 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SmoP56726 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SmoP56726 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SmoP56726 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SmoP56726 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SmoP56726 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.78■□□□□ 0.28
SmoP56726 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SmoP56726 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SmoP56726 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SmoP56726 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.78■□□□□ 0.28
SmoP56726 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SmoP56726 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SmoP56726 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.78■□□□□ 0.28
SmoP56726 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SmoP56726 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.78■□□□□ 0.28
SmoP56726 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.78■□□□□ 0.28
SmoP56726 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SmoP56726 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SmoP56726 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SmoP56726 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
SmoP56726 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SmoP56726 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SmoP56726 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.77■□□□□ 0.28
SmoP56726 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SmoP56726 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SmoP56726 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SmoP56726 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SmoP56726 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.77■□□□□ 0.28
SmoP56726 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SmoP56726 Gm27742-201ENSMUST00000184667 60 ntBASIC16.77■□□□□ 0.28
SmoP56726 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SmoP56726 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SmoP56726 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SmoP56726 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SmoP56726 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SmoP56726 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SmoP56726 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SmoP56726 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SmoP56726 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SmoP56726 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SmoP56726 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SmoP56726 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SmoP56726 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SmoP56726 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms